Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 RNA5SP230-201ENST00000517039 122 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC138915.2-201ENST00000569776 97 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 MIR3691-201ENST00000578066 90 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC090616.2-202ENST00000584248 222 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC009237.13-201ENST00000603193 276 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC079248.2-201ENST00000623779 326 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
CCDC144BQ3MJ40 ZNF542P-204ENST00000482727 1305 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 SMG1P6-201ENST00000532337 2930 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AL121886.1-201ENST00000358609 435 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 RNU6-251P-201ENST00000363235 104 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 RNA5SP339-201ENST00000390987 122 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 SKINT1L-201ENST00000401057 817 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 TPT1P2-201ENST00000413105 503 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AL136133.1-201ENST00000413694 376 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC092634.6-201ENST00000418558 192 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 HMGN2P27-201ENST00000427352 270 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AL596266.1-201ENST00000448132 400 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AL645937.3-201ENST00000453647 936 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 RPS18P6-201ENST00000476880 458 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 RN7SL447P-201ENST00000494711 245 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 RPL30P11-201ENST00000495304 339 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 RPL5P23-201ENST00000496040 868 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC117522.2-201ENST00000510049 657 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 KRT19P6-201ENST00000510983 209 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 SNORA48.10-201ENST00000516965 160 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 OR5M2P-201ENST00000529003 936 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC074029.1-201ENST00000552531 1044 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 NANOGP3-201ENST00000605855 286 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AL022394.1-201ENST00000606979 292 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 ABCC13-202ENST00000463099 3842 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 AC073136.1-201ENST00000449426 2884 ntBASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC144BQ3MJ40 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC020656.2-201ENST00000613291 5309 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 RNU6-146P-201ENST00000384602 108 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 MIR506-201ENST00000384998 124 ntBASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CCDC144BQ3MJ40 PEX12P1-201ENST00000400284 1048 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms