Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 ATP1B1P1-201ENST00000509767 915 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFX4Q33E94 SNORA70.17-201ENST00000516449 133 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AP001781.1-201ENST00000530977 207 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AL109766.1-201ENST00000555080 552 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFX4Q33E94 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.95□□□□□ -1.78
RFX4Q33E94 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AC007620.3-201ENST00000608131 497 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.95□□□□□ -1.78
RFX4Q33E94 MIR6715B-201ENST00000637172 77 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
RFX4Q33E94 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AC008725.1-201ENST00000605123 2263 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFX4Q33E94 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC009229.4-201ENST00000623854 1947 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFX4Q33E94 SNORD113.2-201ENST00000364166 89 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 CYP4F29P-201ENST00000420685 446 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AL590762.4-201ENST00000425885 253 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 RWDD4P2-201ENST00000426392 563 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 YY1P1-201ENST00000427625 668 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 CEACAMP1-201ENST00000434624 1035 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 RPL7P28-201ENST00000437739 740 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX4Q33E94 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC053481.1-201ENST00000467217 306 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC096741.1-201ENST00000472250 846 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 RPL12P20-201ENST00000475538 479 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX4Q33E94 RN7SL826P-201ENST00000479724 288 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 RWDD4P1-201ENST00000488019 565 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
RFX4Q33E94 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX4Q33E94 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX4Q33E94 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX4Q33E94 OR5D15P-201ENST00000531671 942 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 NPM1P35-201ENST00000533043 868 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC063950.1-201ENST00000552036 308 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC084757.1-201ENST00000559987 490 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AC092868.3-201ENST00000560515 784 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.94□□□□□ -1.78
RFX4Q33E94 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC079587.1-201ENST00000603846 277 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 BX322635.1-201ENST00000605804 496 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AL021707.7-201ENST00000607991 416 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 FAM25E-202ENST00000608562 189 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 MIR486-1-201ENST00000612171 68 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AL021997.2-201ENST00000615674 271 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 RN7SL722P-201ENST00000617780 284 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 RN7SL565P-201ENST00000618246 284 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 AP005264.7-201ENST00000625003 745 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RFX4Q33E94 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFX4Q33E94 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.94□□□□□ -1.78
RFX4Q33E94 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.94□□□□□ -1.78
RFX4Q33E94 AC092162.3-201ENST00000624511 1624 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFX4Q33E94 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFX4Q33E94 AL627171.1-201ENST00000618845 1308 ntBASIC3.94□□□□□ -1.78
RFX4Q33E94 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
RFX4Q33E94 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RFX4Q33E94 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
RFX4Q33E94 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFX4Q33E94 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RFX4Q33E94 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
RFX4Q33E94 RNU6-1251P-201ENST00000364502 107 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX4Q33E94 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.93□□□□□ -1.78
RFX4Q33E94 SNRPFP1-201ENST00000414761 252 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.93□□□□□ -1.78
RFX4Q33E94 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX4Q33E94 DPY19L1P2-201ENST00000426647 915 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AL360081.1-201ENST00000428299 555 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 RPL7P4-203ENST00000430239 730 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AL359265.2-201ENST00000434367 631 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.93□□□□□ -1.78
RFX4Q33E94 AL157884.3-201ENST00000448273 1184 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX4Q33E94 CEACAMP6-201ENST00000452007 574 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.93□□□□□ -1.78
RFX4Q33E94 RPL35AP15-201ENST00000468042 339 ntBASIC3.93□□□□□ -1.78
RFX4Q33E94 AC067904.2-201ENST00000517322 1283 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms