Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SRSF4Q08170 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRSF4Q08170 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.72□□□□□ -1.65
SRSF4Q08170 AC116158.1-201ENST00000560231 2129 ntBASIC4.72□□□□□ -1.65
SRSF4Q08170 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.72□□□□□ -1.65
SRSF4Q08170 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SRSF4Q08170 AC092447.7-201ENST00000422212 1621 ntBASIC4.72□□□□□ -1.65
SRSF4Q08170 VN2R3P-201ENST00000422626 1412 ntBASIC4.72□□□□□ -1.65
SRSF4Q08170 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.72□□□□□ -1.65
SRSF4Q08170 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.72□□□□□ -1.65
SRSF4Q08170 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
SRSF4Q08170 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.71□□□□□ -1.65
SRSF4Q08170 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRSF4Q08170 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRSF4Q08170 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRSF4Q08170 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRSF4Q08170 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SRSF4Q08170 OR4G2P-201ENST00000328113 903 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 SNORA74A-201ENST00000364089 198 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 ATP5HP3-201ENST00000396994 486 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 RPL23AP59-201ENST00000399415 461 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 HMGB1P20-201ENST00000402555 677 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 RPS3AP2-201ENST00000407190 754 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 RN7SKP33-201ENST00000410942 340 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 RPS4XP5-201ENST00000419038 768 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC093155.2-201ENST00000420734 937 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 Z99497.1-201ENST00000421282 135 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AL662874.1-201ENST00000426065 230 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 NPM1P22-201ENST00000427761 952 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 CNOT7P2-201ENST00000441051 832 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AL137845.2-201ENST00000444292 988 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 EEF1B2P6-201ENST00000445713 673 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AL157827.1-201ENST00000447622 132 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC003071.1-201ENST00000451219 789 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 SEPT7P3-201ENST00000455017 621 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AL122020.1-201ENST00000472287 459 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC092865.4-201ENST00000477936 615 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 UBA52P7-201ENST00000486088 380 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 EIF3KP3-201ENST00000514461 639 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 PRELID3BP4-201ENST00000515476 571 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC007954.1-201ENST00000554198 494 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AL390334.1-201ENST00000556395 450 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC079171.1-201ENST00000568788 914 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 MIR4505-201ENST00000582238 73 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 BNIP3P26-201ENST00000600827 554 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC079395.2-201ENST00000610982 737 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC135068.5-201ENST00000624197 983 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC099654.12-201ENST00000639868 649 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.71□□□□□ -1.66
SRSF4Q08170 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 OR13C1P-202ENST00000641378 2919 ntBASIC4.71□□□□□ -1.66
SRSF4Q08170 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRSF4Q08170 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms