Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.75□□□□□ -1.81
H3F3AP84243 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
H3F3AP84243 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3F3AP84243 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 MIR383-201ENST00000362257 73 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 ST13P16-201ENST00000401760 781 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AL603766.1-201ENST00000407763 664 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 AL391219.1-201ENST00000422570 483 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 HMGB1P32-201ENST00000425971 565 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 COX6B1P7-201ENST00000430845 235 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 RPS23P7-201ENST00000466210 444 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AC010618.1-201ENST00000469924 477 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC026979.1-201ENST00000492525 396 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 RPS27AP13-201ENST00000498403 237 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 IGLVIV-53-201ENST00000520107 367 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AC105233.3-201ENST00000531125 744 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 CYCSP29-201ENST00000533731 318 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC063950.1-201ENST00000552036 308 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.74□□□□□ -1.81
H3F3AP84243 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.74□□□□□ -1.81
H3F3AP84243 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC123786.2-201ENST00000603459 275 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 AL031666.3-201ENST00000609320 1006 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 MIR6716-201ENST00000613413 80 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 AC008785.1-201ENST00000624475 456 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 LINC02471-203ENST00000641941 4752 ntBASIC3.74□□□□□ -1.81
H3F3AP84243 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.74□□□□□ -1.81
H3F3AP84243 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
H3F3AP84243 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 AC009951.1-201ENST00000623674 2614 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.73□□□□□ -1.81
H3F3AP84243 RAB9AP4-201ENST00000415230 609 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AC234779.1-201ENST00000425910 285 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 COX6CP15-201ENST00000426313 211 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 HLA-N-201ENST00000437516 135 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 NUTF2P3-201ENST00000448540 384 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3AP84243 NDUFA5P9-201ENST00000472609 340 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 HPRT1P1-201ENST00000509498 657 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 RN7SKP122-201ENST00000515923 296 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 IFITM8P-201ENST00000522529 394 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3AP84243 AC109635.6-201ENST00000525487 1113 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 DEFB109D-201ENST00000529497 240 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3AP84243 KPNA2P3-201ENST00000584190 848 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AL713998.2-201ENST00000604538 1198 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.73□□□□□ -1.81
H3F3AP84243 MIR378J-201ENST00000611988 109 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AC083809.1-201ENST00000615051 472 ntBASIC3.73□□□□□ -1.81
H3F3AP84243 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3AP84243 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.73□□□□□ -1.81
H3F3AP84243 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.73□□□□□ -1.81
H3F3AP84243 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
H3F3AP84243 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms