Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC022336.1-201ENST00000475510 337 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.15□□□□□ -1.91
CCL20P78556 AC010627.1-201ENST00000503819 1294 ntBASIC3.15□□□□□ -1.91
CCL20P78556 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 RN7SKP83-201ENST00000516512 178 ntBASIC3.15□□□□□ -1.91
CCL20P78556 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL20P78556 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 AC092747.2-201ENST00000545069 983 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 CYP2C60P-201ENST00000566088 139 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCL20P78556 MIR4716-201ENST00000579628 84 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC110743.1-201ENST00000584870 478 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC010680.3-201ENST00000604215 520 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC114878.2-201ENST00000604863 1251 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AL451044.1-201ENST00000604867 238 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC007620.3-201ENST00000608131 497 ntBASIC3.15□□□□□ -1.91
CCL20P78556 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL20P78556 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.15□□□□□ -1.91
CCL20P78556 AC009318.3-201ENST00000616916 503 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC048341.3-201ENST00000619323 491 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC145207.9-201ENST00000623802 325 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC091905.1-201ENST00000624400 311 ntBASIC3.15□□□□□ -1.91
CCL20P78556 AC004808.2-201ENST00000627965 773 ntBASIC3.15□□□□□ -1.91
CCL20P78556 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 AC140479.6-201ENST00000633535 357 ntBASIC3.15□□□□□ -1.91
CCL20P78556 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.15□□□□□ -1.91
CCL20P78556 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCL20P78556 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCL20P78556 PNPT1P2-201ENST00000456768 2050 ntBASIC3.15□□□□□ -1.91
CCL20P78556 PRO1804-201ENST00000623780 2050 ntBASIC3.15□□□□□ -1.91
CCL20P78556 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.14□□□□□ -1.91
CCL20P78556 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CCL20P78556 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCL20P78556 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 RNA5SP305-201ENST00000362665 119 ntBASIC3.14□□□□□ -1.91
CCL20P78556 SNORD35B-201ENST00000363660 87 ntBASIC3.14□□□□□ -1.91
CCL20P78556 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.14□□□□□ -1.91
CCL20P78556 SNORA11F-201ENST00000408237 128 ntBASIC3.14□□□□□ -1.91
CCL20P78556 RNA5SP36-201ENST00000410197 133 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 MFSD13B-201ENST00000420133 1290 ntBASIC3.14□□□□□ -1.91
CCL20P78556 RBMY2QP-201ENST00000429799 1147 ntBASIC3.14□□□□□ -1.91
CCL20P78556 MTCO3P21-201ENST00000430791 643 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AL358472.1-201ENST00000431295 329 ntBASIC3.14□□□□□ -1.91
CCL20P78556 RPS6P12-201ENST00000432491 726 ntBASIC3.14□□□□□ -1.91
CCL20P78556 RPS29P31-201ENST00000446147 164 ntBASIC3.14□□□□□ -1.91
CCL20P78556 ARL2BPP10-201ENST00000446487 531 ntBASIC3.14□□□□□ -1.91
CCL20P78556 CALM1P2-201ENST00000452941 448 ntBASIC3.14□□□□□ -1.91
CCL20P78556 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL20P78556 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 RPS23P1-201ENST00000491662 432 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC026784.1-201ENST00000507986 352 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.14□□□□□ -1.91
CCL20P78556 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL20P78556 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.14□□□□□ -1.91
CCL20P78556 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL20P78556 AGGF1P8-201ENST00000562979 1000 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC009117.1-201ENST00000563948 554 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 NDUFA5P11-201ENST00000567995 343 ntBASIC3.14□□□□□ -1.91
CCL20P78556 MIR4330-201ENST00000579077 105 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCL20P78556 AC244505.7-201ENST00000599675 272 ntBASIC3.14□□□□□ -1.91
CCL20P78556 AL121612.2-201ENST00000612261 482 ntBASIC3.14□□□□□ -1.91
CCL20P78556 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 AL139089.1-201ENST00000620372 975 ntBASIC3.14□□□□□ -1.91
CCL20P78556 OR6C71P-202ENST00000641886 1107 ntBASIC3.14□□□□□ -1.91
CCL20P78556 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL20P78556 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
CCL20P78556 AC095050.2-201ENST00000510748 1458 ntBASIC3.14□□□□□ -1.91
CCL20P78556 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL20P78556 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.13□□□□□ -1.91
CCL20P78556 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCL20P78556 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL20P78556 MIR184-201ENST00000384962 84 ntBASIC3.13□□□□□ -1.91
CCL20P78556 HLFP1-201ENST00000402375 499 ntBASIC3.13□□□□□ -1.91
CCL20P78556 RN7SKP235-201ENST00000410662 305 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms