Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC067931.1-201ENST00000624190 671 ntBASIC5.03□□□□□ -1.6
HDAC4P56524 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.03□□□□□ -1.6
HDAC4P56524 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC4P56524 SAMMSON-226ENST00000642089 1582 ntBASIC5.03□□□□□ -1.6
HDAC4P56524 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HDAC4P56524 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HDAC4P56524 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC4P56524 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HDAC4P56524 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HDAC4P56524 MIR92A2-201ENST00000385299 75 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.02□□□□□ -1.61
HDAC4P56524 COX6B1P1-201ENST00000415962 213 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 LINC00993-201ENST00000420453 540 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 ARF4P4-201ENST00000439608 520 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.02□□□□□ -1.61
HDAC4P56524 OR52J1P-201ENST00000450596 932 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC010733.1-201ENST00000451515 401 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 AC234781.3-201ENST00000452540 973 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AURKAPS2-201ENST00000454983 333 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 RPS29P22-201ENST00000472363 168 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.02□□□□□ -1.61
HDAC4P56524 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.02□□□□□ -1.61
HDAC4P56524 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.02□□□□□ -1.61
HDAC4P56524 HPRT1P1-201ENST00000509498 657 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 SNORA19.3-201ENST00000516165 130 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 AP001207.2-201ENST00000519490 539 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.02□□□□□ -1.61
HDAC4P56524 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.02□□□□□ -1.61
HDAC4P56524 AC009117.1-201ENST00000563948 554 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 RN7SL802P-201ENST00000577858 299 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.02□□□□□ -1.61
HDAC4P56524 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.02□□□□□ -1.61
HDAC4P56524 AP002802.2-201ENST00000605877 235 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC055764.2-201ENST00000610089 670 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC100827.5-201ENST00000615883 426 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 CYCSP41-201ENST00000616920 296 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC012414.7-202ENST00000622705 1090 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC015908.5-201ENST00000623289 343 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AL078595.3-201ENST00000623815 1166 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 BMS1P21-201ENST00000634565 365 ntBASIC5.02□□□□□ -1.61
HDAC4P56524 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.02□□□□□ -1.61
HDAC4P56524 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.02□□□□□ -1.61
HDAC4P56524 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HDAC4P56524 AC009229.4-201ENST00000623854 1947 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HDAC4P56524 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HDAC4P56524 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.01□□□□□ -1.61
HDAC4P56524 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.01□□□□□ -1.61
HDAC4P56524 CASC19-206ENST00000641028 1430 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 AC015813.6-201ENST00000624409 5808 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HDAC4P56524 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HDAC4P56524 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 ARL4AP5-201ENST00000404372 599 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 FAR2P2-201ENST00000413041 594 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC114755.2-201ENST00000413520 361 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.01□□□□□ -1.61
HDAC4P56524 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.01□□□□□ -1.61
HDAC4P56524 AL807761.1-201ENST00000417622 171 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 E2F6P2-201ENST00000420708 748 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 FAR2P4-202ENST00000425399 584 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.01□□□□□ -1.61
HDAC4P56524 AC007559.1-201ENST00000428736 355 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AL451139.1-201ENST00000434718 346 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 AL353093.1-201ENST00000441292 436 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.01□□□□□ -1.61
HDAC4P56524 RPL7P61-201ENST00000451721 751 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.01□□□□□ -1.61
HDAC4P56524 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.01□□□□□ -1.61
HDAC4P56524 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.01□□□□□ -1.61
HDAC4P56524 RPL7P16-201ENST00000479738 738 ntBASIC5.01□□□□□ -1.61
HDAC4P56524 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HDAC4P56524 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HDAC4P56524 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.01□□□□□ -1.61
HDAC4P56524 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.01□□□□□ -1.61
HDAC4P56524 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms