Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.54□□□□□ -1.68
CASP4P49662 AC006517.1-201ENST00000480485 328 ntBASIC4.54□□□□□ -1.68
CASP4P49662 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.54□□□□□ -1.68
CASP4P49662 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 HIGD1AP5-201ENST00000529959 259 ntBASIC4.54□□□□□ -1.68
CASP4P49662 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.54□□□□□ -1.68
CASP4P49662 TRAV11-201ENST00000539512 339 ntBASIC4.54□□□□□ -1.68
CASP4P49662 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.54□□□□□ -1.68
CASP4P49662 AC007599.1-201ENST00000568688 1174 ntBASIC4.54□□□□□ -1.68
CASP4P49662 IPO5P1-202ENST00000600039 287 ntBASIC4.54□□□□□ -1.68
CASP4P49662 AC083809.1-201ENST00000615051 472 ntBASIC4.54□□□□□ -1.68
CASP4P49662 AC092159.4-201ENST00000624944 550 ntBASIC4.54□□□□□ -1.68
CASP4P49662 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.54□□□□□ -1.68
CASP4P49662 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.54□□□□□ -1.68
CASP4P49662 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CASP4P49662 AL133243.3-201ENST00000617415 3004 ntBASIC4.54□□□□□ -1.68
CASP4P49662 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.53□□□□□ -1.68
CASP4P49662 AC005261.4-201ENST00000600047 1385 ntBASIC4.53□□□□□ -1.68
CASP4P49662 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CASP4P49662 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CASP4P49662 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CASP4P49662 MT-TP-201ENST00000387461 68 ntBASIC4.53□□□□□ -1.68
CASP4P49662 RPS24P12-201ENST00000402084 394 ntBASIC4.53□□□□□ -1.68
CASP4P49662 RPS27AP11-201ENST00000402798 447 ntBASIC4.53□□□□□ -1.68
CASP4P49662 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 OR6K4P-201ENST00000423179 955 ntBASIC4.53□□□□□ -1.68
CASP4P49662 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.53□□□□□ -1.68
CASP4P49662 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 AC006011.1-201ENST00000442758 349 ntBASIC4.53□□□□□ -1.68
CASP4P49662 NUTF2P3-201ENST00000448540 384 ntBASIC4.53□□□□□ -1.68
CASP4P49662 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.53□□□□□ -1.68
CASP4P49662 RN7SL585P-201ENST00000470538 280 ntBASIC4.53□□□□□ -1.68
CASP4P49662 NDUFA5P9-201ENST00000472609 340 ntBASIC4.53□□□□□ -1.68
CASP4P49662 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.53□□□□□ -1.68
CASP4P49662 snoU109.6-201ENST00000516831 118 ntBASIC4.53□□□□□ -1.68
CASP4P49662 MTCYBP19-201ENST00000517463 1124 ntBASIC4.53□□□□□ -1.68
CASP4P49662 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.53□□□□□ -1.68
CASP4P49662 IGHV3-63-201ENST00000518422 341 ntBASIC4.53□□□□□ -1.68
CASP4P49662 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.53□□□□□ -1.68
CASP4P49662 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.53□□□□□ -1.68
CASP4P49662 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.53□□□□□ -1.68
CASP4P49662 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.53□□□□□ -1.68
CASP4P49662 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.53□□□□□ -1.68
CASP4P49662 AC090312.1-201ENST00000580637 348 ntBASIC4.53□□□□□ -1.68
CASP4P49662 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.53□□□□□ -1.68
CASP4P49662 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.53□□□□□ -1.68
CASP4P49662 BMS1P7-201ENST00000602440 1052 ntBASIC4.53□□□□□ -1.68
CASP4P49662 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.53□□□□□ -1.68
CASP4P49662 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.53□□□□□ -1.68
CASP4P49662 AC095038.2-201ENST00000621464 1070 ntBASIC4.53□□□□□ -1.68
CASP4P49662 AC079298.2-201ENST00000623885 459 ntBASIC4.53□□□□□ -1.68
CASP4P49662 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 ZNF962P-201ENST00000443465 3140 ntBASIC4.53□□□□□ -1.68
CASP4P49662 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.53□□□□□ -1.68
CASP4P49662 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CASP4P49662 AC011266.1-201ENST00000624119 3569 ntBASIC4.53□□□□□ -1.68
CASP4P49662 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.52□□□□□ -1.69
CASP4P49662 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.52□□□□□ -1.69
CASP4P49662 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.52□□□□□ -1.69
CASP4P49662 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CASP4P49662 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.52□□□□□ -1.69
CASP4P49662 RPL23AP38-201ENST00000423801 469 ntBASIC4.52□□□□□ -1.69
CASP4P49662 AC234779.1-201ENST00000425910 285 ntBASIC4.52□□□□□ -1.69
CASP4P49662 MTND2P2-201ENST00000434633 945 ntBASIC4.52□□□□□ -1.69
CASP4P49662 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.52□□□□□ -1.69
CASP4P49662 RAD23BP3-201ENST00000454157 1152 ntBASIC4.52□□□□□ -1.69
CASP4P49662 RNA5SP246-201ENST00000458909 119 ntBASIC4.52□□□□□ -1.69
CASP4P49662 RPS20P4-201ENST00000461659 355 ntBASIC4.52□□□□□ -1.69
CASP4P49662 RPL5P30-201ENST00000465511 891 ntBASIC4.52□□□□□ -1.69
CASP4P49662 AC010618.1-201ENST00000469924 477 ntBASIC4.52□□□□□ -1.69
CASP4P49662 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.52□□□□□ -1.69
CASP4P49662 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.52□□□□□ -1.69
CASP4P49662 OR51K1P-201ENST00000510214 950 ntBASIC4.52□□□□□ -1.69
CASP4P49662 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.52□□□□□ -1.69
CASP4P49662 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.52□□□□□ -1.69
CASP4P49662 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.52□□□□□ -1.69
CASP4P49662 RN7SL600P-201ENST00000581811 299 ntBASIC4.52□□□□□ -1.69
CASP4P49662 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.52□□□□□ -1.69
CASP4P49662 SNX18P1Y-201ENST00000616231 511 ntBASIC4.52□□□□□ -1.69
CASP4P49662 MIR7702-201ENST00000621931 59 ntBASIC4.52□□□□□ -1.69
CASP4P49662 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CASP4P49662 MIR6830-201ENST00000636015 70 ntBASIC4.52□□□□□ -1.69
CASP4P49662 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
CASP4P49662 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CASP4P49662 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms