Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 MIR4458-201ENST00000578872 75 ntBASIC4.1□□□□□ -1.75
CDX1P47902 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.1□□□□□ -1.75
CDX1P47902 MIR4443-201ENST00000585052 53 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC011447.4-201ENST00000587562 111 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.1□□□□□ -1.75
CDX1P47902 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 AC002487.1-201ENST00000604565 994 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC009597.2-201ENST00000604659 592 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC093673.2-201ENST00000609674 331 ntBASIC4.1□□□□□ -1.75
CDX1P47902 MIR7155-201ENST00000615925 56 ntBASIC4.1□□□□□ -1.75
CDX1P47902 MIR6839-201ENST00000620425 113 ntBASIC4.1□□□□□ -1.75
CDX1P47902 AC099494.2-201ENST00000623371 978 ntBASIC4.1□□□□□ -1.75
CDX1P47902 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDX1P47902 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CDX1P47902 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 AC018529.3-201ENST00000624212 2254 ntBASIC4.1□□□□□ -1.75
CDX1P47902 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDX1P47902 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.1□□□□□ -1.75
CDX1P47902 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 SCARNA15-201ENST00000607520 4325 ntBASIC4.09□□□□□ -1.75
CDX1P47902 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDX1P47902 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDX1P47902 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDX1P47902 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDX1P47902 RPL23P2-201ENST00000320371 421 ntBASIC4.09□□□□□ -1.75
CDX1P47902 U8.4-201ENST00000363626 134 ntBASIC4.09□□□□□ -1.75
CDX1P47902 RNU6-236P-201ENST00000363886 106 ntBASIC4.09□□□□□ -1.75
CDX1P47902 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDX1P47902 MIR600-201ENST00000385007 98 ntBASIC4.09□□□□□ -1.75
CDX1P47902 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDX1P47902 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 RSL24D1P1-201ENST00000404972 493 ntBASIC4.09□□□□□ -1.75
CDX1P47902 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.09□□□□□ -1.75
CDX1P47902 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 BTF3P8-201ENST00000414577 526 ntBASIC4.09□□□□□ -1.75
CDX1P47902 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AC104634.1-201ENST00000452720 462 ntBASIC4.09□□□□□ -1.75
CDX1P47902 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDX1P47902 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 RPSAP50-201ENST00000481955 852 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AC020890.1-201ENST00000491837 504 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDX1P47902 AC008837.1-201ENST00000511513 412 ntBASIC4.09□□□□□ -1.75
CDX1P47902 RN7SKP82-201ENST00000516786 223 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.09□□□□□ -1.75
CDX1P47902 AC004217.3-201ENST00000551552 878 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDX1P47902 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDX1P47902 RPL21P7-201ENST00000557463 483 ntBASIC4.09□□□□□ -1.75
CDX1P47902 HMGB3P26-201ENST00000560051 582 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.09□□□□□ -1.75
CDX1P47902 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 AC017100.2-201ENST00000584628 355 ntBASIC4.09□□□□□ -1.75
CDX1P47902 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 BNIP3P39-201ENST00000601077 554 ntBASIC4.09□□□□□ -1.75
CDX1P47902 RPAP2P1-201ENST00000603626 1168 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC073387.2-201ENST00000604797 784 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC018754.1-201ENST00000607486 925 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
CDX1P47902 MIR6864-201ENST00000617935 70 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AL023881.1-201ENST00000621088 301 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC055839.1-201ENST00000634467 498 ntBASIC4.09□□□□□ -1.75
CDX1P47902 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 Z98755.1-201ENST00000407015 1384 ntBASIC4.09□□□□□ -1.75
CDX1P47902 AC111188.2-201ENST00000529697 1387 ntBASIC4.09□□□□□ -1.75
CDX1P47902 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDX1P47902 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.75
CDX1P47902 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms