Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
COL15A1P39059 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 RNA5SP105-201ENST00000391123 113 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 RPL22P22-201ENST00000395439 379 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 AP002784.2-201ENST00000397300 549 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 AC008173.1-201ENST00000418901 264 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.73□□□□□ -1.49
COL15A1P39059 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 REREP1Y-201ENST00000422655 198 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 Z74021.1-201ENST00000423610 407 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 FO393414.1-201ENST00000428697 1184 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.73□□□□□ -1.49
COL15A1P39059 REREP2Y-201ENST00000439103 200 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 RPS27P5-201ENST00000444247 244 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.73□□□□□ -1.49
COL15A1P39059 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.73□□□□□ -1.49
COL15A1P39059 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.73□□□□□ -1.49
COL15A1P39059 AC010735.1-201ENST00000567305 1026 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 AC245100.7-201ENST00000609678 442 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 AC140725.3-201ENST00000616193 880 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 AC006927.2-201ENST00000639256 389 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 LINC01808-202ENST00000641680 1116 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL15A1P39059 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.73□□□□□ -1.49
COL15A1P39059 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL15A1P39059 LINC00622-201ENST00000562811 1570 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL15A1P39059 AC005261.4-201ENST00000600047 1385 ntBASIC5.73□□□□□ -1.49
COL15A1P39059 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL15A1P39059 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.72□□□□□ -1.49
COL15A1P39059 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL15A1P39059 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL15A1P39059 RNU6-252P-201ENST00000363232 107 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 RNU1-83P-201ENST00000363426 164 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 RNU1-132P-201ENST00000364300 164 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.72□□□□□ -1.49
COL15A1P39059 RNU6-1263P-201ENST00000384601 106 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 MIR921-201ENST00000401133 56 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 CTSL3P-202ENST00000412179 788 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 UBE2V1P9-201ENST00000414760 368 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 OR2AH1P-201ENST00000425717 928 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 FTLP19-201ENST00000433300 394 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 MTND1P26-201ENST00000440488 538 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 RPL23AP43-201ENST00000446445 471 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 AC069304.1-201ENST00000491593 704 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.72□□□□□ -1.49
COL15A1P39059 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 AC090515.3-201ENST00000560431 315 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.72□□□□□ -1.49
COL15A1P39059 AC113403.1-201ENST00000604910 193 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 AL356863.1-201ENST00000623378 1080 ntBASIC5.72□□□□□ -1.49
COL15A1P39059 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.72□□□□□ -1.49
COL15A1P39059 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL15A1P39059 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.72□□□□□ -1.49
COL15A1P39059 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.72□□□□□ -1.49
COL15A1P39059 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL15A1P39059 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.72□□□□□ -1.49
COL15A1P39059 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.72□□□□□ -1.49
COL15A1P39059 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.72□□□□□ -1.49
COL15A1P39059 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL15A1P39059 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL15A1P39059 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.71□□□□□ -1.49
COL15A1P39059 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
COL15A1P39059 AC105074.1-201ENST00000623380 3095 ntBASIC5.71□□□□□ -1.49
COL15A1P39059 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.71□□□□□ -1.49
COL15A1P39059 RN7SKP280-201ENST00000364196 304 ntBASIC5.71□□□□□ -1.5
COL15A1P39059 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL15A1P39059 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL15A1P39059 MIR23B-201ENST00000384832 97 ntBASIC5.71□□□□□ -1.5
COL15A1P39059 AL592291.1-201ENST00000403830 352 ntBASIC5.71□□□□□ -1.5
COL15A1P39059 AL445189.1-201ENST00000405722 338 ntBASIC5.71□□□□□ -1.5
COL15A1P39059 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.71□□□□□ -1.5
COL15A1P39059 AC115285.1-201ENST00000424879 736 ntBASIC5.71□□□□□ -1.5
COL15A1P39059 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.71□□□□□ -1.5
COL15A1P39059 MED6P1-201ENST00000439659 713 ntBASIC5.71□□□□□ -1.5
COL15A1P39059 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.71□□□□□ -1.5
COL15A1P39059 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.71□□□□□ -1.5
COL15A1P39059 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.71□□□□□ -1.5
COL15A1P39059 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.71□□□□□ -1.5
COL15A1P39059 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms