Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.23□□□□□ -1.73
RORAP35398 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.23□□□□□ -1.73
RORAP35398 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RORAP35398 AC007342.9-201ENST00000623877 1385 ntBASIC4.23□□□□□ -1.73
RORAP35398 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RORAP35398 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.22□□□□□ -1.73
RORAP35398 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RORAP35398 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RORAP35398 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.22□□□□□ -1.73
RORAP35398 AC008033.1-201ENST00000216407 1162 ntBASIC4.22□□□□□ -1.73
RORAP35398 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
RORAP35398 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RORAP35398 AL607077.1-201ENST00000401718 499 ntBASIC4.22□□□□□ -1.73
RORAP35398 ST13P16-201ENST00000401760 781 ntBASIC4.22□□□□□ -1.73
RORAP35398 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
RORAP35398 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.22□□□□□ -1.73
RORAP35398 NPM1P26-201ENST00000426339 738 ntBASIC4.22□□□□□ -1.73
RORAP35398 AC004975.1-201ENST00000428733 208 ntBASIC4.22□□□□□ -1.73
RORAP35398 RPL21P91-201ENST00000429231 479 ntBASIC4.22□□□□□ -1.73
RORAP35398 RPL23AP25-201ENST00000430973 463 ntBASIC4.22□□□□□ -1.73
RORAP35398 ACTR3P2-201ENST00000439585 1257 ntBASIC4.22□□□□□ -1.73
RORAP35398 PHBP16-201ENST00000446318 950 ntBASIC4.22□□□□□ -1.73
RORAP35398 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.22□□□□□ -1.73
RORAP35398 RPL7P31-201ENST00000450192 724 ntBASIC4.22□□□□□ -1.73
RORAP35398 HMGB3P21-201ENST00000452483 547 ntBASIC4.22□□□□□ -1.73
RORAP35398 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.22□□□□□ -1.73
RORAP35398 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.22□□□□□ -1.73
RORAP35398 RPL23AP2-201ENST00000471227 466 ntBASIC4.22□□□□□ -1.73
RORAP35398 STRADBP1-201ENST00000478954 1281 ntBASIC4.22□□□□□ -1.73
RORAP35398 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.22□□□□□ -1.73
RORAP35398 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.22□□□□□ -1.73
RORAP35398 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.22□□□□□ -1.73
RORAP35398 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.22□□□□□ -1.73
RORAP35398 RNA5SP497-201ENST00000516081 97 ntBASIC4.22□□□□□ -1.73
RORAP35398 RN7SKP21-201ENST00000516503 220 ntBASIC4.22□□□□□ -1.73
RORAP35398 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.22□□□□□ -1.73
RORAP35398 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.22□□□□□ -1.73
RORAP35398 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.22□□□□□ -1.73
RORAP35398 PSMB7P1-201ENST00000556349 514 ntBASIC4.22□□□□□ -1.73
RORAP35398 AC110743.1-201ENST00000584870 478 ntBASIC4.22□□□□□ -1.73
RORAP35398 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RORAP35398 AC091979.2-201ENST00000607514 214 ntBASIC4.22□□□□□ -1.73
RORAP35398 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.22□□□□□ -1.73
RORAP35398 AL133370.2-201ENST00000619934 439 ntBASIC4.22□□□□□ -1.73
RORAP35398 AP000843.1-201ENST00000624880 701 ntBASIC4.22□□□□□ -1.73
RORAP35398 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RORAP35398 EIF2AP4-201ENST00000424793 1781 ntBASIC4.22□□□□□ -1.73
RORAP35398 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.73
RORAP35398 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
RORAP35398 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.21□□□□□ -1.73
RORAP35398 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.21□□□□□ -1.74
RORAP35398 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RORAP35398 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RORAP35398 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RORAP35398 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RORAP35398 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RORAP35398 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RORAP35398 RNU4-23P-201ENST00000362839 140 ntBASIC4.21□□□□□ -1.74
RORAP35398 RNU6-1251P-201ENST00000364502 107 ntBASIC4.21□□□□□ -1.74
RORAP35398 AC240504.1-201ENST00000395709 845 ntBASIC4.21□□□□□ -1.74
RORAP35398 RN7SKP222-201ENST00000410651 315 ntBASIC4.21□□□□□ -1.74
RORAP35398 VDAC1P9-201ENST00000412766 841 ntBASIC4.21□□□□□ -1.74
RORAP35398 AC011933.1-201ENST00000413334 321 ntBASIC4.21□□□□□ -1.74
RORAP35398 AL139095.3-201ENST00000419672 1203 ntBASIC4.21□□□□□ -1.74
RORAP35398 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.21□□□□□ -1.74
RORAP35398 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.21□□□□□ -1.74
RORAP35398 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RORAP35398 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.21□□□□□ -1.74
RORAP35398 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.21□□□□□ -1.74
RORAP35398 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.21□□□□□ -1.74
RORAP35398 AC012671.1-201ENST00000451912 203 ntBASIC4.21□□□□□ -1.74
RORAP35398 RPL7P32-201ENST00000457119 744 ntBASIC4.21□□□□□ -1.74
RORAP35398 AC116533.1-201ENST00000459748 321 ntBASIC4.21□□□□□ -1.74
RORAP35398 RPL23AP65-201ENST00000475608 468 ntBASIC4.21□□□□□ -1.74
RORAP35398 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.21□□□□□ -1.74
RORAP35398 AC108022.1-201ENST00000493466 478 ntBASIC4.21□□□□□ -1.74
RORAP35398 RPS4XP18-201ENST00000495480 763 ntBASIC4.21□□□□□ -1.74
RORAP35398 PRELID3BP7-201ENST00000503606 469 ntBASIC4.21□□□□□ -1.74
RORAP35398 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.21□□□□□ -1.74
RORAP35398 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.21□□□□□ -1.74
RORAP35398 RNA5SP446-201ENST00000515955 82 ntBASIC4.21□□□□□ -1.74
RORAP35398 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.21□□□□□ -1.74
RORAP35398 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.21□□□□□ -1.74
RORAP35398 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.21□□□□□ -1.74
RORAP35398 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.21□□□□□ -1.74
RORAP35398 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.21□□□□□ -1.74
RORAP35398 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.21□□□□□ -1.74
RORAP35398 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RORAP35398 AL445567.2-201ENST00000618935 498 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms