Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AL133370.2-201ENST00000619934 439 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AC067931.1-201ENST00000624190 671 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHMT2P34897 AC110792.3-201ENST00000595906 1614 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 AL158163.1-201ENST00000603915 1649 ntBASIC4.19□□□□□ -1.74
SHMT2P34897 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SHMT2P34897 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SHMT2P34897 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
SHMT2P34897 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SHMT2P34897 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SHMT2P34897 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 AC011266.1-201ENST00000624119 3569 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 AC126755.2-208ENST00000327792 462 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC138969.1-213ENST00000331436 462 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 RPL32P3-201ENST00000359025 275 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 RNA5SP366-201ENST00000365454 123 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 OR6C69P-201ENST00000394268 893 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 MIR1911-201ENST00000410783 80 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 RPEP2-201ENST00000432149 701 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.18□□□□□ -1.74
SHMT2P34897 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 Z99127.2-201ENST00000441426 334 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AL451050.1-201ENST00000450126 415 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.18□□□□□ -1.74
SHMT2P34897 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC026979.1-201ENST00000492525 396 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC025445.1-201ENST00000502728 300 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC083829.1-201ENST00000503756 657 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 PARP4P3-201ENST00000510265 317 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.18□□□□□ -1.74
SHMT2P34897 TRAV8-5-201ENST00000537369 341 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.18□□□□□ -1.74
SHMT2P34897 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.18□□□□□ -1.74
SHMT2P34897 AC023575.1-201ENST00000580510 358 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC005034.4-201ENST00000603612 899 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AC090953.1-201ENST00000604305 1092 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 MLECP1-201ENST00000615893 709 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.18□□□□□ -1.74
SHMT2P34897 MIR6758-201ENST00000620653 63 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 AP000843.1-201ENST00000624880 701 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHMT2P34897 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHMT2P34897 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 AP000756.2-201ENST00000624168 2567 ntBASIC4.18□□□□□ -1.74
SHMT2P34897 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.18□□□□□ -1.74
SHMT2P34897 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SHMT2P34897 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHMT2P34897 IQCB2P-201ENST00000401788 1633 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.17□□□□□ -1.74
SHMT2P34897 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SHMT2P34897 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHMT2P34897 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 CCT8P1-201ENST00000413611 1657 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHMT2P34897 NCSTNP1-201ENST00000406229 144 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 RAB28P1-201ENST00000411517 641 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 RPL23AP26-201ENST00000412728 464 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.17□□□□□ -1.74
SHMT2P34897 AL512504.1-201ENST00000415494 778 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 RBMY1KP-201ENST00000423480 476 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 BX119904.1-201ENST00000432026 348 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC093716.1-201ENST00000435923 377 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 CALM1P2-201ENST00000452941 448 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.17□□□□□ -1.74
SHMT2P34897 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 RPL7P22-201ENST00000466005 733 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 UQCRHP4-201ENST00000471686 272 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC139783.2-201ENST00000504847 1145 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SHMT2P34897 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHMT2P34897 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.17□□□□□ -1.74
SHMT2P34897 AC138701.1-201ENST00000524329 714 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.17□□□□□ -1.74
SHMT2P34897 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.17□□□□□ -1.74
SHMT2P34897 KPNA2P3-201ENST00000584190 848 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.17□□□□□ -1.74
SHMT2P34897 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.17□□□□□ -1.74
SHMT2P34897 ELOCP28-201ENST00000590044 317 ntBASIC4.17□□□□□ -1.74
SHMT2P34897 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.17□□□□□ -1.74
SHMT2P34897 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms