Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP1P30622 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CLIP1P30622 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.28□□□□□ -1.4
CLIP1P30622 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CLIP1P30622 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.28□□□□□ -1.4
CLIP1P30622 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
CLIP1P30622 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLIP1P30622 RNA5SP119-201ENST00000362715 117 ntBASIC6.27□□□□□ -1.41
CLIP1P30622 MIR199A2-201ENST00000385289 110 ntBASIC6.27□□□□□ -1.41
CLIP1P30622 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.27□□□□□ -1.41
CLIP1P30622 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP1P30622 PPIAP15-201ENST00000479662 484 ntBASIC6.27□□□□□ -1.41
CLIP1P30622 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP1P30622 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.27□□□□□ -1.41
CLIP1P30622 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.27□□□□□ -1.41
CLIP1P30622 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.27□□□□□ -1.41
CLIP1P30622 AC069200.1-201ENST00000609511 323 ntBASIC6.27□□□□□ -1.41
CLIP1P30622 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP1P30622 AC055839.1-201ENST00000634467 498 ntBASIC6.27□□□□□ -1.41
CLIP1P30622 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC6.27□□□□□ -1.41
CLIP1P30622 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CLIP1P30622 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CLIP1P30622 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.27□□□□□ -1.41
CLIP1P30622 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CLIP1P30622 SNORA73.2-201ENST00000364946 201 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP1P30622 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP1P30622 CRYBB2P1-203ENST00000415709 538 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6.26□□□□□ -1.41
CLIP1P30622 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.26□□□□□ -1.41
CLIP1P30622 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP1P30622 RPS4XP12-201ENST00000461747 709 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 RN7SL323P-201ENST00000494712 295 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP1P30622 FTH1P11-201ENST00000517577 551 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 AL353600.1-201ENST00000608148 251 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 AL669942.2-201ENST00000620352 697 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 AC244100.1-202ENST00000621554 382 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 LDHAL6CP-202ENST00000550738 3224 ntBASIC6.26□□□□□ -1.41
CLIP1P30622 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.26□□□□□ -1.41
CLIP1P30622 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CLIP1P30622 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP1P30622 SNORA3C-201ENST00000408792 125 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP1P30622 RAB9AP3-201ENST00000412737 573 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP1P30622 OR4F13P-201ENST00000428478 931 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 RPL23AP83-201ENST00000434984 473 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 RAB9AP1-201ENST00000449393 573 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP1P30622 PRSS3P4-201ENST00000453323 162 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 CYCSP30-201ENST00000546447 172 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 GTF2IP22-201ENST00000554443 182 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 NPM1P47-201ENST00000560843 856 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP1P30622 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP1P30622 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP1P30622 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP1P30622 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP1P30622 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.25□□□□□ -1.41
CLIP1P30622 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP1P30622 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP1P30622 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP1P30622 RPL17P50-201ENST00000396131 546 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 AL139039.2-201ENST00000407436 479 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 AC093578.1-201ENST00000415219 368 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP1P30622 EIF4EP1-201ENST00000422311 642 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.25□□□□□ -1.41
CLIP1P30622 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.25□□□□□ -1.41
CLIP1P30622 NPM1P34-201ENST00000428821 893 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP1P30622 CYCSP53-201ENST00000455540 265 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 RN7SL271P-201ENST00000487601 295 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CLIP1P30622 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.25□□□□□ -1.41
CLIP1P30622 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP1P30622 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC6.25□□□□□ -1.41
CLIP1P30622 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.25□□□□□ -1.41
CLIP1P30622 AC020978.9-201ENST00000624380 1141 ntBASIC6.25□□□□□ -1.41
CLIP1P30622 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.24□□□□□ -1.41
CLIP1P30622 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.24□□□□□ -1.41
CLIP1P30622 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
CLIP1P30622 AP002001.2-201ENST00000529025 1469 ntBASIC6.24□□□□□ -1.41
CLIP1P30622 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC6.24□□□□□ -1.41
CLIP1P30622 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLIP1P30622 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CLIP1P30622 MIR1251-201ENST00000408552 70 ntBASIC6.24□□□□□ -1.41
CLIP1P30622 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP1P30622 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP1P30622 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP1P30622 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CLIP1P30622 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.24□□□□□ -1.41
CLIP1P30622 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms