Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 MIR19A-201ENST00000384878 82 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 RPL7P60-201ENST00000397636 735 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 CES5AP1-201ENST00000400418 859 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 CTSLP8-201ENST00000413075 967 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP1P23763 RPS12P23-201ENST00000419579 400 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.73□□□□□ -1.49
VAMP1P23763 GPR143P-201ENST00000434155 205 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 GAPDHP59-201ENST00000435908 267 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 RPS4XP4-201ENST00000443195 763 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 OR7E116P-201ENST00000448529 957 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP1P23763 RPL36AP55-201ENST00000454114 305 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 OR7E62P-201ENST00000456741 477 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC022364.2-201ENST00000457963 554 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC090686.1-201ENST00000481577 749 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP1P23763 FTH1P21-201ENST00000512179 511 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC109635.3-201ENST00000529536 185 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AP006587.5-201ENST00000532033 739 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC136944.5-201ENST00000573021 151 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.73□□□□□ -1.49
VAMP1P23763 MIR4642-201ENST00000583943 82 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 SNORD84-203ENST00000584275 78 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 OR6L2P-201ENST00000608207 925 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC245517.5-201ENST00000611529 162 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AC023310.4-201ENST00000613130 650 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 uc_338.12-201ENST00000616344 181 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 AC009704.2-201ENST00000618739 483 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 FLII-230ENST00000628188 156 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC244258.1-201ENST00000637553 1071 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 HLA-B-257ENST00000640094 147 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC026951.1-201ENST00000559530 2459 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VAMP1P23763 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
VAMP1P23763 AC010928.1-201ENST00000592477 1447 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 FAM91A3P-201ENST00000456826 2544 ntBASIC5.73□□□□□ -1.49
VAMP1P23763 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.73□□□□□ -1.49
VAMP1P23763 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP1P23763 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.73□□□□□ -1.49
VAMP1P23763 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP1P23763 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 OR1S2-201ENST00000302592 978 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 RPL24P4-201ENST00000326586 421 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 AL121886.1-201ENST00000358609 435 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VAMP1P23763 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VAMP1P23763 SNORA70.9-201ENST00000384370 135 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 RN7SKP247-201ENST00000411094 308 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP1P23763 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.72□□□□□ -1.49
VAMP1P23763 OR1AA1P-201ENST00000419597 916 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 AC092832.1-201ENST00000422934 400 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.72□□□□□ -1.49
VAMP1P23763 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.72□□□□□ -1.49
VAMP1P23763 EIF3IP1-201ENST00000433048 967 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 MRPS18BP2-201ENST00000434310 759 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 AL731534.1-201ENST00000434711 269 ntBASIC5.72□□□□□ -1.49
VAMP1P23763 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VAMP1P23763 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC5.72□□□□□ -1.49
VAMP1P23763 RPL23AP20-201ENST00000447965 421 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms