Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 LRRC6P1-201ENST00000532188 885 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.97□□□□□ -1.45
SNRPA1P09661 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.97□□□□□ -1.45
SNRPA1P09661 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.97□□□□□ -1.45
SNRPA1P09661 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.97□□□□□ -1.45
SNRPA1P09661 AC091057.2-201ENST00000602594 792 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 LSM1P2-201ENST00000604911 322 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.97□□□□□ -1.45
SNRPA1P09661 AC092106.3-201ENST00000611308 722 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 MLECP1-201ENST00000615893 709 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 AP005019.3-201ENST00000620418 560 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.97□□□□□ -1.45
SNRPA1P09661 MIR6830-201ENST00000636015 70 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 AC090897.3-201ENST00000636973 1157 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNRPA1P09661 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNRPA1P09661 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNRPA1P09661 MTND5P23-201ENST00000430812 1655 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNRPA1P09661 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.97□□□□□ -1.45
SNRPA1P09661 AC108467.2-201ENST00000617640 1597 ntBASIC5.97□□□□□ -1.45
SNRPA1P09661 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.96□□□□□ -1.45
SNRPA1P09661 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.96□□□□□ -1.45
SNRPA1P09661 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.96□□□□□ -1.45
SNRPA1P09661 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNRPA1P09661 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.96□□□□□ -1.45
SNRPA1P09661 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.96□□□□□ -1.46
SNRPA1P09661 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC017079.1-201ENST00000333650 415 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 U6.112-201ENST00000384129 70 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 RNU6-636P-201ENST00000384598 107 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AL356967.1-201ENST00000406305 431 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 U3.35-201ENST00000408405 208 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 MTND2P18-201ENST00000419962 1030 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 REREP1Y-201ENST00000422655 198 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 RSL24D1P6-201ENST00000426934 401 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 REREP2Y-201ENST00000439103 200 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC069540.1-201ENST00000446320 988 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AL445669.2-201ENST00000454425 421 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 PRDX3P4-201ENST00000470828 747 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AC103987.1-201ENST00000473394 348 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 IGBP1P5-201ENST00000507524 1000 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.96□□□□□ -1.46
SNRPA1P09661 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AC061975.8-201ENST00000587058 721 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.96□□□□□ -1.46
SNRPA1P09661 MTCO2P22-201ENST00000603246 681 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 SUMO2P14-201ENST00000604488 293 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 Z95327.3-201ENST00000610385 572 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AC012409.3-201ENST00000611343 981 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 AC005962.2-201ENST00000611427 652 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.96□□□□□ -1.46
SNRPA1P09661 AL034370.1-201ENST00000397254 1590 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNRPA1P09661 AL031119.1-201ENST00000404707 1879 ntBASIC5.96□□□□□ -1.46
SNRPA1P09661 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SNRPA1P09661 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SNRPA1P09661 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNRPA1P09661 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNRPA1P09661 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNRPA1P09661 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNRPA1P09661 SNORD116-12-201ENST00000384468 92 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 MIR659-201ENST00000384963 97 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 SKINT1L-201ENST00000401057 817 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AL049693.1-201ENST00000402760 611 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.95□□□□□ -1.46
SNRPA1P09661 RPL7P27-201ENST00000403775 720 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AP000580.1-201ENST00000404439 358 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms