Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC139713.2-214ENST00000642059 1811 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 AC092162.3-201ENST00000624511 1624 ntBASIC3.76□□□□□ -1.81
HLA-DPB1P04440 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HLA-DPB1P04440 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 MIR331-201ENST00000362302 94 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 RNA5SP447-201ENST00000363749 119 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC097374.1-203ENST00000400783 485 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 ST13P16-201ENST00000401760 781 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AL139095.3-201ENST00000419672 1203 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AL356387.2-201ENST00000422272 243 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC009480.2-201ENST00000422916 432 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC068287.1-201ENST00000430283 295 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC011742.1-201ENST00000431448 434 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC011998.1-201ENST00000433403 117 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AL035551.1-201ENST00000446931 348 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 CALM1P2-201ENST00000452941 448 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 DHFRP3-201ENST00000455595 559 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC053481.1-201ENST00000467217 306 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 RPS27AP16-201ENST00000492222 470 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AL592156.1-201ENST00000508758 304 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 OR5BC1P-201ENST00000529327 739 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC068790.4-201ENST00000602474 263 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC022387.2-201ENST00000604050 448 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC133552.5-201ENST00000604266 540 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AC007546.1-201ENST00000619452 559 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 AP001005.3-201ENST00000622049 129 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HLA-DPB1P04440 VPS35P1-201ENST00000563400 1518 ntBASIC3.75□□□□□ -1.81
HLA-DPB1P04440 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 SNORA37-201ENST00000384504 129 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 SNORD65-201ENST00000391079 73 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 U3.22-201ENST00000391120 215 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 RPS4XP9-201ENST00000405151 780 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AL590806.1-201ENST00000415818 853 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC245028.1-201ENST00000423259 256 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 DNAJC19P7-201ENST00000428811 344 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC087650.1-201ENST00000431445 468 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 Z99127.2-201ENST00000441426 334 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC068831.4-201ENST00000556118 109 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC084759.1-201ENST00000561168 290 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 MIR4700-201ENST00000578311 74 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC124856.1-201ENST00000600819 896 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 BMS1P7-201ENST00000602440 1052 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC019193.2-201ENST00000610012 634 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 MIR486-1-201ENST00000612171 68 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC026368.1-201ENST00000614934 690 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AP005264.7-201ENST00000625003 745 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 FAM35DP-201ENST00000323387 2712 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC090017.1-201ENST00000548612 1779 ntBASIC3.74□□□□□ -1.81
HLA-DPB1P04440 AC110792.3-201ENST00000595906 1614 ntBASIC3.73□□□□□ -1.81
HLA-DPB1P04440 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms