Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 CIR1P1-201ENST00000524055 1133 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLPTM1O96005 HMGN2P6-201ENST00000551091 273 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AP000919.1-202ENST00000581139 1264 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.42□□□□□ -1.7
CLPTM1O96005 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 OR6R2P-201ENST00000609216 300 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AC245100.7-201ENST00000609678 442 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AC124016.2-201ENST00000610058 665 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 AC009163.6-201ENST00000612367 342 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CLPTM1O96005 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.42□□□□□ -1.7
CLPTM1O96005 AC097520.1-201ENST00000624435 385 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 LINC01739-205ENST00000641890 573 ntBASIC4.42□□□□□ -1.7
CLPTM1O96005 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.42□□□□□ -1.7
CLPTM1O96005 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.42□□□□□ -1.7
CLPTM1O96005 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CLPTM1O96005 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.41□□□□□ -1.7
CLPTM1O96005 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLPTM1O96005 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC012020.1-201ENST00000624541 1728 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLPTM1O96005 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 RNA5SP513-201ENST00000364648 118 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 RNU4-7P-201ENST00000364758 141 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 ATP5HP3-201ENST00000396994 486 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 VN1R8P-201ENST00000407739 893 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.41□□□□□ -1.7
CLPTM1O96005 RPL23AP27-201ENST00000415161 451 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 DPY19L1P2-201ENST00000426647 915 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC069540.1-201ENST00000446320 988 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.41□□□□□ -1.7
CLPTM1O96005 DUXAP8-207ENST00000456786 622 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC096571.1-202ENST00000506634 735 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC015795.1-201ENST00000513669 327 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 HNRNPKP5-201ENST00000515300 253 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 RNU6-1308P-201ENST00000516817 103 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.41□□□□□ -1.7
CLPTM1O96005 OR7E13P-201ENST00000526052 910 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC084757.1-201ENST00000559987 490 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 SUMO2P14-201ENST00000604488 293 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC025175.1-201ENST00000606482 759 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC012557.1-201ENST00000607115 611 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AL021707.7-201ENST00000607991 416 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC019131.2-201ENST00000609071 870 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 DUXAP10-204ENST00000612052 616 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 RNU6-1192P-201ENST00000612197 107 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 RMST_10.1-201ENST00000616309 154 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 RNU6-489P-201ENST00000618289 107 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC109809.1-201ENST00000619665 545 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC093875.1-201ENST00000623688 504 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 IQCB2P-201ENST00000401788 1633 ntBASIC4.41□□□□□ -1.7
CLPTM1O96005 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
CLPTM1O96005 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.41□□□□□ -1.7
CLPTM1O96005 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLPTM1O96005 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.7
CLPTM1O96005 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLPTM1O96005 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CLPTM1O96005 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.4□□□□□ -1.7
CLPTM1O96005 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
CLPTM1O96005 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 SNURFL-201ENST00000309296 343 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 RNU6-207P-201ENST00000384137 107 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 MT-TP-201ENST00000387461 68 ntBASIC4.4□□□□□ -1.71
CLPTM1O96005 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLPTM1O96005 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms