Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNA5SP39-201ENST00000411245 120 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC009965.2-201ENST00000425328 970 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 RPL23AP52-201ENST00000439311 478 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RPL23AP89-201ENST00000439324 255 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RPL23AP81-201ENST00000455252 467 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC006517.1-201ENST00000480485 328 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RPS6P4-201ENST00000494693 758 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC005912.1-201ENST00000495392 255 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC017037.1-201ENST00000508460 471 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC018797.3-201ENST00000513388 1241 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RNA5SP73-201ENST00000516744 108 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RN7SKP92-201ENST00000517266 244 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN2BO60939 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC068831.4-201ENST00000556118 109 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC007599.1-201ENST00000568688 1174 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 AC113403.1-201ENST00000604910 193 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC025175.1-201ENST00000606482 759 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AL121873.1-201ENST00000616013 524 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC123768.4-201ENST00000616244 701 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RMST_5.1-201ENST00000618704 126 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 RMST_9.1-201ENST00000619945 193 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AL445363.3-201ENST00000623080 671 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC002044.3-201ENST00000623314 541 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN2BO60939 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCN2BO60939 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN2BO60939 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN2BO60939 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN2BO60939 AC090229.1-201ENST00000590983 1609 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 AC093311.1-201ENST00000506586 2021 ntBASIC4.02□□□□□ -1.77
SCN2BO60939 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN2BO60939 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SCN2BO60939 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN2BO60939 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 AC016588.2-201ENST00000632484 3021 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SCN2BO60939 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SCN2BO60939 RNA5SP239-201ENST00000410218 129 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 JKAMPP1-201ENST00000413804 919 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN2BO60939 CEACAMP1-201ENST00000434624 1035 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN2BO60939 AL512326.1-201ENST00000443050 721 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SCN2BO60939 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN2BO60939 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN2BO60939 AC113398.2-201ENST00000507630 558 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.01□□□□□ -1.77
SCN2BO60939 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SCN2BO60939 IGLVIV-65-201ENST00000517313 360 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.01□□□□□ -1.77
SCN2BO60939 TRAV8-5-201ENST00000537369 341 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN2BO60939 AC063949.1-201ENST00000552900 865 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN2BO60939 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN2BO60939 MIR4443-201ENST00000585052 53 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AC068790.5-201ENST00000602741 355 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AC012603.1-201ENST00000606424 528 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AC116651.1-201ENST00000609724 556 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AL133370.2-201ENST00000619934 439 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AL356121.2-201ENST00000624715 780 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AC092159.4-201ENST00000624944 550 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 AC009950.2-201ENST00000636548 183 ntBASIC4.01□□□□□ -1.77
SCN2BO60939 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN2BO60939 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.01□□□□□ -1.77
SCN2BO60939 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN2BO60939 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
SCN2BO60939 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SCN2BO60939 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms