Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 VN1R32P-201ENST00000452234 905 ntBASIC5.15□□□□□ -1.59
PROM1O43490 RANP1-206ENST00000455094 651 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC090638.1-201ENST00000498296 909 ntBASIC5.15□□□□□ -1.59
PROM1O43490 ENPP7P11-201ENST00000505915 627 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC010424.1-201ENST00000506336 297 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC008837.2-201ENST00000513076 418 ntBASIC5.15□□□□□ -1.59
PROM1O43490 BX510359.5-201ENST00000515651 304 ntBASIC5.15□□□□□ -1.59
PROM1O43490 SCARNA20.4-201ENST00000516969 131 ntBASIC5.15□□□□□ -1.59
PROM1O43490 RN7SKP99-201ENST00000517028 307 ntBASIC5.15□□□□□ -1.59
PROM1O43490 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.15□□□□□ -1.59
PROM1O43490 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AC083923.1-201ENST00000523708 376 ntBASIC5.15□□□□□ -1.59
PROM1O43490 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.15□□□□□ -1.59
PROM1O43490 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 AC022880.1-201ENST00000534017 973 ntBASIC5.15□□□□□ -1.59
PROM1O43490 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 BLZF2P-201ENST00000553776 1130 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.15□□□□□ -1.59
PROM1O43490 AC116553.2-201ENST00000564203 463 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC012435.1-202ENST00000568772 240 ntBASIC5.15□□□□□ -1.59
PROM1O43490 ISCA1P3-201ENST00000577104 373 ntBASIC5.15□□□□□ -1.59
PROM1O43490 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PROM1O43490 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PROM1O43490 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 MIR7853-201ENST00000584820 132 ntBASIC5.15□□□□□ -1.59
PROM1O43490 MIR4999-201ENST00000585029 91 ntBASIC5.15□□□□□ -1.59
PROM1O43490 RSL24D1P11-201ENST00000591045 491 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC006272.2-201ENST00000594725 163 ntBASIC5.15□□□□□ -1.59
PROM1O43490 VN1R90P-201ENST00000595717 726 ntBASIC5.15□□□□□ -1.59
PROM1O43490 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AC095055.1-201ENST00000603472 1113 ntBASIC5.15□□□□□ -1.59
PROM1O43490 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.15□□□□□ -1.59
PROM1O43490 AC092653.1-201ENST00000608509 531 ntBASIC5.15□□□□□ -1.59
PROM1O43490 STMN1P1-201ENST00000617809 440 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AL607023.1-201ENST00000620045 248 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC135068.5-201ENST00000624197 983 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AP003072.4-201ENST00000624580 310 ntBASIC5.15□□□□□ -1.59
PROM1O43490 MIR4278-201ENST00000636094 69 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC100757.1-201ENST00000616872 1835 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.15□□□□□ -1.59
PROM1O43490 AC109780.1-201ENST00000451768 1344 ntBASIC5.15□□□□□ -1.59
PROM1O43490 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 C4BPAP1-201ENST00000415474 1893 ntBASIC5.15□□□□□ -1.59
PROM1O43490 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.59
PROM1O43490 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 SMG1P6-201ENST00000532337 2930 ntBASIC5.14□□□□□ -1.59
PROM1O43490 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PROM1O43490 KARSP3-201ENST00000571212 1504 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 OR56B2P-201ENST00000317102 954 ntBASIC5.14□□□□□ -1.59
PROM1O43490 IL6STP1-201ENST00000346911 1020 ntBASIC5.14□□□□□ -1.59
PROM1O43490 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PROM1O43490 RNA5SP319-201ENST00000362768 119 ntBASIC5.14□□□□□ -1.59
PROM1O43490 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.14□□□□□ -1.59
PROM1O43490 OR5H15-201ENST00000383696 930 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC093719.1-202ENST00000392735 373 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AP000534.2-201ENST00000412729 568 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC004022.2-201ENST00000413824 193 ntBASIC5.14□□□□□ -1.59
PROM1O43490 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 AC012519.1-201ENST00000424588 610 ntBASIC5.14□□□□□ -1.59
PROM1O43490 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.14□□□□□ -1.59
PROM1O43490 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 DPY19L1P2-201ENST00000426647 915 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.14□□□□□ -1.59
PROM1O43490 AC244035.1-201ENST00000430042 390 ntBASIC5.14□□□□□ -1.59
PROM1O43490 RPL12P17-201ENST00000432393 498 ntBASIC5.14□□□□□ -1.59
PROM1O43490 FTH1P16-201ENST00000435241 552 ntBASIC5.14□□□□□ -1.59
PROM1O43490 SPRYD7P1-201ENST00000443861 570 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AL929288.2-201ENST00000446368 407 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC105399.1-202ENST00000447303 205 ntBASIC5.14□□□□□ -1.59
PROM1O43490 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AL354710.1-201ENST00000453641 246 ntBASIC5.14□□□□□ -1.59
PROM1O43490 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PROM1O43490 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.14□□□□□ -1.59
PROM1O43490 AC104689.1-201ENST00000473356 768 ntBASIC5.14□□□□□ -1.59
PROM1O43490 RPL30P6-201ENST00000475925 342 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC093270.2-201ENST00000486157 792 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC231760.1-201ENST00000498002 260 ntBASIC5.14□□□□□ -1.59
PROM1O43490 DSTNP2-201ENST00000504533 515 ntBASIC5.14□□□□□ -1.59
PROM1O43490 HMGB1P44-201ENST00000508597 572 ntBASIC5.14□□□□□ -1.59
PROM1O43490 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms