Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC099676.1-201ENST00000608886 657 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC015922.4-201ENST00000612568 690 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AL590410.1-201ENST00000617925 333 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 MIR7702-201ENST00000621931 59 ntBASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SMIM28A0A1B0GU29 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SMIM28A0A1B0GU29 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SMIM28A0A1B0GU29 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMIM28A0A1B0GU29 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.4□□□□□ -1.7
SMIM28A0A1B0GU29 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SMIM28A0A1B0GU29 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.4□□□□□ -1.7
SMIM28A0A1B0GU29 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 SNORA60-201ENST00000362396 134 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 RN7SKP74-201ENST00000362849 309 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 RNU1-64P-201ENST00000365443 163 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 RNU4-6P-201ENST00000410804 122 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 PDSS1P1-201ENST00000422953 1114 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AL158073.1-201ENST00000426848 1104 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 RAD23BP3-201ENST00000454157 1152 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 RPS4XP12-201ENST00000461747 709 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC021146.3-201ENST00000511911 260 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 IFITM8P-201ENST00000522529 394 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 MIR4286-201ENST00000580651 93 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC053481.4-201ENST00000583164 216 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC110743.1-201ENST00000584870 478 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC245128.3-201ENST00000594721 748 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 MIR6868-201ENST00000611215 58 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC090246.1-201ENST00000616499 426 ntBASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMIM28A0A1B0GU29 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 SCN1A-220ENST00000641603 12506 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 MIR365B-201ENST00000362317 111 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 RPL32P23-201ENST00000397237 405 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 TRIM60P17-201ENST00000415181 719 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC013470.3-201ENST00000420252 1194 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 OR5BE1P-201ENST00000425977 939 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC122718.1-201ENST00000439448 744 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC092691.2-201ENST00000461787 803 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 FAM133DP-201ENST00000464802 691 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 RPL29P14-201ENST00000495837 428 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC010460.1-201ENST00000507087 466 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 RNU7-143P-201ENST00000516781 65 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC025627.2-201ENST00000576220 160 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC012417.1-201ENST00000582307 1039 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC006363.1-201ENST00000603806 463 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC012213.4-201ENST00000606457 354 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AP005264.7-201ENST00000625003 745 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 OR5BE1P-202ENST00000641168 1176 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 AC087565.3-202ENST00000642085 1603 ntBASIC4.39□□□□□ -1.71
SMIM28A0A1B0GU29 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 IL6STP1-201ENST00000346911 1020 ntBASIC4.38□□□□□ -1.71
SMIM28A0A1B0GU29 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms