Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC018804.1-201ENST00000430381 618 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 ARL2BPP10-201ENST00000446487 531 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 Y_RNA.635-201ENST00000459041 101 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 GMFBP1-201ENST00000467831 427 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 VN1R17P-201ENST00000472048 1090 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC012181.1-201ENST00000479895 423 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC114797.1-201ENST00000514003 728 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RNU4-29P-201ENST00000515943 174 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SCARNA24.1-201ENST00000516465 137 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC007537.1-201ENST00000539347 327 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 HAUS8P1-201ENST00000549005 542 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AL163153.1-201ENST00000554223 283 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RPL7AP69-201ENST00000595306 806 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC010680.4-201ENST00000605334 543 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SNORA11.6-201ENST00000619030 128 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 MIR6503-201ENST00000622884 86 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC091925.1-201ENST00000623204 462 ntBASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB11Q9Y5F2 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AL121768.1-201ENST00000613917 2544 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RNA5SP152-201ENST00000365184 110 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-1318P-201ENST00000365389 103 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RPL7P60-201ENST00000397636 735 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AL583835.1-201ENST00000399570 407 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AL078604.1-201ENST00000404609 466 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RPL31P52-201ENST00000407532 367 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RNU4-26P-201ENST00000410270 107 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RNA5SP155-201ENST00000411154 129 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 PRELID3BP11-201ENST00000414230 479 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC009310.1-201ENST00000414414 451 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RPL18AP14-201ENST00000417685 526 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 PRUNEP1-201ENST00000425846 705 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC022022.1-201ENST00000430304 178 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 NPM1P18-201ENST00000434232 732 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AL450996.1-201ENST00000445574 1202 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC099670.1-201ENST00000455141 783 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC098818.1-201ENST00000478593 252 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 OR4D12P-201ENST00000509361 911 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RNU6-123P-201ENST00000516163 102 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 RNA5SP337-201ENST00000517007 109 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 OR5BN1P-201ENST00000532955 829 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AP002373.2-201ENST00000541631 1060 ntBASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB11Q9Y5F2 AC107958.1-201ENST00000556576 290 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms