Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC080013.6-201ENST00000606185 215 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC024257.5-201ENST00000612739 531 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC139769.3-201ENST00000618383 175 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL512506.2-201ENST00000624472 458 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC000367.1-201ENST00000452711 1766 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC100871.1-201ENST00000507871 1456 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC104454.1-201ENST00000421341 1401 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC114947.2-201ENST00000565748 2125 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC026951.1-201ENST00000559530 2459 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RNU6-413P-201ENST00000384115 107 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RNU1-106P-201ENST00000384382 164 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 HSPA8P15-201ENST00000401676 786 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AL109941.1-201ENST00000401925 229 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AL590084.1-201ENST00000407885 387 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LINC01881-201ENST00000416103 412 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 OR5AW1P-201ENST00000426334 1006 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RPL34P6-201ENST00000432390 345 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC234781.3-201ENST00000452540 973 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC002553.2-201ENST00000453217 340 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC096741.1-201ENST00000472250 846 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC091959.2-201ENST00000477363 321 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RPL7P41-201ENST00000485823 957 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 SNORA3.4-201ENST00000515969 96 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 BRD9P1-201ENST00000529855 560 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AP004607.2-201ENST00000533949 322 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC135279.1-201ENST00000543493 504 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC006349.1-201ENST00000555526 235 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC109446.2-201ENST00000567872 497 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RN7SL52P-201ENST00000584271 284 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC069304.3-201ENST00000603938 1084 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AP000255.1-201ENST00000610276 676 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 MIR7973-1-201ENST00000614683 76 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RN7SL722P-201ENST00000617780 284 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RN7SL565P-201ENST00000618246 284 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 MFSD8-245ENST00000641743 948 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS4AQ9UN37 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.04□□□□□ -1.6
VPS4AQ9UN37 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 STX3-208ENST00000641815 3236 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms