Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 RHOT1P2-201ENST00000366423 333 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC097374.1-203ENST00000400783 485 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 RNA5SP39-201ENST00000411245 120 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 RBMY1KP-201ENST00000423480 476 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 DYNLL1P7-201ENST00000429273 258 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 RPS27AP12-201ENST00000429552 465 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 RAB28P3-201ENST00000448325 597 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 SEPT14P1-201ENST00000458703 648 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC022336.1-201ENST00000475510 337 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AL133372.1-201ENST00000493565 745 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC026402.1-201ENST00000513642 170 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 NPM1P35-201ENST00000533043 868 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC084824.1-201ENST00000550917 1005 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC090515.3-201ENST00000560431 315 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC019131.2-201ENST00000609071 870 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC024941.1-201ENST00000612250 334 ntBASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.17□□□□□ -1.58
CTNNA3Q9UI47 AC016588.2-201ENST00000632484 3021 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 MIR365B-201ENST00000362317 111 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 SKP1P3-201ENST00000429280 487 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 BX119904.1-201ENST00000432026 348 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 MAPRE1P3-201ENST00000435438 796 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 ELOCP10-201ENST00000440624 327 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AL353748.1-201ENST00000440753 474 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 ABCF2P2-201ENST00000450549 296 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 RPL7P22-201ENST00000466005 733 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC011276.1-201ENST00000469688 323 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 MIR2116-201ENST00000517221 80 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 MIR3939-201ENST00000582614 106 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 ELOCP34-201ENST00000604436 327 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC116447.1-201ENST00000613153 453 ntBASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.16□□□□□ -1.58
CTNNA3Q9UI47 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 AC100871.1-201ENST00000507871 1456 ntBASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 AC092079.1-201ENST00000558620 1985 ntBASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
CTNNA3Q9UI47 OR4K17-201ENST00000315543 1032 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 RNU1-15P-201ENST00000353977 144 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 RNA5SP509-201ENST00000364577 119 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC004552.1-201ENST00000419089 348 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 CEACAMP1-201ENST00000434624 1035 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 RPL23AP52-201ENST00000439311 478 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC122718.1-201ENST00000439448 744 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 FAM133DP-201ENST00000464802 691 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 RPS26P3-201ENST00000470205 348 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC090543.2-201ENST00000483963 348 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC004057.1-201ENST00000485827 348 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 RPS6P4-201ENST00000494693 758 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC025674.1-201ENST00000507074 324 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms