Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 IL6STP1-201ENST00000346911 1020 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 RNU1-130P-201ENST00000363930 160 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 EIF4HP2-201ENST00000424380 563 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 RPS27AP12-201ENST00000429552 465 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 NUTF2P3-201ENST00000448540 384 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 ISCUP1-201ENST00000454451 448 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 PSMC1P13-201ENST00000458195 985 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 RN7SL98P-201ENST00000462271 300 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC090543.1-201ENST00000492168 485 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 RNA5SP497-201ENST00000516081 97 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 VTA1P2-201ENST00000520205 911 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 BNIP3P5-201ENST00000562290 498 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AL353600.1-201ENST00000608148 251 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC135803.1-201ENST00000608748 565 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC015804.1-201ENST00000622935 435 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 AL359922.3-201ENST00000624779 1670 ntBASIC4.67□□□□□ -1.66
HPS4Q9NQG7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.67□□□□□ -1.66
HPS4Q9NQG7 MAPK10-286ENST00000641208 8747 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC011933.1-201ENST00000413334 321 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 RPS12P5-201ENST00000423449 371 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 RSL24D1P8-201ENST00000434442 492 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AL157827.1-201ENST00000447622 132 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 TPRKBP1-201ENST00000456243 481 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 RPL7P32-201ENST00000457119 744 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC116533.1-201ENST00000459748 321 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC021205.1-201ENST00000468797 348 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC021146.3-201ENST00000511911 260 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC084824.1-201ENST00000550917 1005 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 PSMB7P1-201ENST00000556349 514 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC021483.2-201ENST00000567415 758 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AL109618.2-201ENST00000605527 211 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC017076.1-201ENST00000607613 578 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC020634.1-201ENST00000608701 549 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AC107308.1-201ENST00000615897 301 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 OR2L1P-202ENST00000641567 1023 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 AL672167.1-203ENST00000641299 2975 ntBASIC4.66□□□□□ -1.66
HPS4Q9NQG7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HPS4Q9NQG7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms