Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC090229.1-201ENST00000590983 1609 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 SNORD96B-201ENST00000386148 79 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 SDHCP2-201ENST00000398565 501 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 ARL4AP5-201ENST00000404372 599 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 EIF4EP1-201ENST00000422311 642 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC004448.2-201ENST00000422360 586 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 RPS29P17-201ENST00000430795 166 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC011998.1-201ENST00000433403 117 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 RPL23AP93-201ENST00000440847 484 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 TDGF1P1-201ENST00000445734 527 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 RN7SL810P-201ENST00000493031 276 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC098799.3-201ENST00000506095 438 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 RNA5SP497-201ENST00000516081 97 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC010476.1-201ENST00000519111 851 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC007224.1-201ENST00000564410 144 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC015804.1-201ENST00000622935 435 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AC067931.1-201ENST00000624190 671 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 AP000843.1-201ENST00000624880 701 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF3Q9HD45 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 RN7SKP263-201ENST00000411194 309 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 CEACAMP8-201ENST00000413902 580 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 TMSB10P2-201ENST00000416049 131 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 RPS27AP12-201ENST00000429552 465 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 RPS4XP18-201ENST00000495480 763 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC023050.1-201ENST00000498198 304 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC026402.1-201ENST00000513642 170 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 HIGD1AP18-201ENST00000520730 278 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC084033.1-201ENST00000550830 633 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC092868.3-201ENST00000560515 784 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC074050.1-201ENST00000563247 211 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC021483.2-201ENST00000567415 758 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 ABI1P1-201ENST00000603375 1120 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC011472.4-201ENST00000615848 491 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 AC005086.4-201ENST00000623065 213 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 MAPK10-303ENST00000641324 3959 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 PNPT1P2-201ENST00000456768 2050 ntBASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM9SF3Q9HD45 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.53□□□□□ -1.69
TM9SF3Q9HD45 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AL136964.1-201ENST00000622038 2990 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 SNORA57.1-201ENST00000391227 145 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 LAP3P1-201ENST00000403648 294 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC011933.1-201ENST00000413334 321 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 RPL7P57-201ENST00000423238 740 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 NDUFA5P10-201ENST00000432147 357 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 PPIAP13-201ENST00000434706 478 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms