Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 RPL23AP19-201ENST00000436229 369 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 RAB11AP1-201ENST00000442978 646 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 IGBP1P3-201ENST00000447449 1000 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 MRPL35P2-201ENST00000448009 511 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AL596266.1-201ENST00000448132 400 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 PPIAP27-201ENST00000453800 265 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 RPL5P32-201ENST00000454085 879 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 TPT1P7-201ENST00000458300 517 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 RNU6-956P-201ENST00000458868 103 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AL024509.2-201ENST00000493462 493 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AL035404.1-201ENST00000497982 568 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC023050.1-201ENST00000498198 304 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS11Q9H270 HPRT1P2-201ENST00000505250 544 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 ENPP7P11-201ENST00000505915 627 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS11Q9H270 RNU6-347P-201ENST00000516658 105 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 IGLV3-24-201ENST00000517477 197 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AP001646.1-201ENST00000527936 915 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS11Q9H270 MIR3154-201ENST00000577829 84 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC011260.1-201ENST00000578420 472 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC006566.1-201ENST00000608943 513 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AC004223.4-201ENST00000612426 332 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 uc_338.7-201ENST00000621834 124 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AL359697.1-201ENST00000624879 587 ntBASIC5.59□□□□□ -1.51
VPS11Q9H270 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VPS11Q9H270 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS11Q9H270 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VPS11Q9H270 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VPS11Q9H270 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
VPS11Q9H270 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VPS11Q9H270 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
VPS11Q9H270 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 HSPA8P14-201ENST00000552265 1805 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 COX6B1P3-201ENST00000312310 260 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 OR4G2P-201ENST00000328113 903 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VPS11Q9H270 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 RNA5SP296-201ENST00000410523 111 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC104651.1-201ENST00000427559 735 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 TPMTP4-201ENST00000450749 678 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 RPS27AP2-201ENST00000457576 465 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 UBDP1-202ENST00000457888 382 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AP000797.2-201ENST00000475768 606 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 RPL30P6-201ENST00000475925 342 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 RPL23AP37-201ENST00000479658 549 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC009120.1-201ENST00000493458 473 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 ARL4AP1-201ENST00000503220 705 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC112198.1-201ENST00000505369 1220 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 DUTP7-201ENST00000507982 486 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC098799.2-201ENST00000509466 868 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC016559.2-201ENST00000510759 359 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC008837.1-201ENST00000511513 412 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 HSD3BP3-201ENST00000514706 994 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 IGKV2-36-201ENST00000519999 223 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 MED28P5-201ENST00000528254 438 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 OR8A2P-201ENST00000528631 952 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms