Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 BCORP1-203ENST00000513194 5093 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 RBMY1HP-201ENST00000382759 1389 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RN7SKP185-201ENST00000362813 326 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 CBX1P3-201ENST00000413296 527 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RPL17P12-201ENST00000413391 526 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC245054.1-201ENST00000420944 258 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 Z93242.1-201ENST00000427102 353 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RPL7P36-201ENST00000444633 681 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC114755.5-201ENST00000447760 831 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 TPT1P14-201ENST00000448018 505 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AL034418.1-201ENST00000448675 860 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 KLF3P2-201ENST00000465138 268 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RPS3AP17-201ENST00000472594 777 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC006539.1-201ENST00000481419 501 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 PRMT5P1-201ENST00000514351 598 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC006504.3-201ENST00000586818 523 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC027243.2-201ENST00000602530 724 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC004009.2-201ENST00000623016 728 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AC129778.1-202ENST00000623812 261 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AL591379.1-207ENST00000635982 261 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
FOXP3Q9BZS1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC008627.1-201ENST00000517511 1704 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RNU1-134P-201ENST00000362935 165 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RNU6-98P-201ENST00000384173 107 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RNU1-136P-201ENST00000384181 164 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC007066.1-201ENST00000392902 381 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RN7SKP206-201ENST00000410823 293 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC130360.1-201ENST00000425489 1117 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL512649.1-201ENST00000428997 581 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC092427.1-201ENST00000439177 601 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RPS23P9-201ENST00000448848 438 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 BX248409.1-201ENST00000455497 255 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RNU1-88P-201ENST00000459274 128 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RPL7P24-201ENST00000493052 752 ntBASIC6.03□□□□□ -1.44
FOXP3Q9BZS1 RN7SL101P-201ENST00000496350 279 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms