Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.84□□□□□ -1.8
RSPO3Q9BXY4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.84□□□□□ -1.8
RSPO3Q9BXY4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC009951.1-201ENST00000623674 2614 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC011155.1-201ENST00000316512 456 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 MIR448-201ENST00000362131 111 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AL049693.1-201ENST00000402760 611 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 RPL5P19-201ENST00000404228 893 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 YY1P1-201ENST00000427625 668 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 TPTE2P1-204ENST00000435256 593 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 RPS3AP54-201ENST00000435535 734 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 RAD23BP3-201ENST00000454157 1152 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 PPIAP21-201ENST00000464473 501 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 CCDC75P1-201ENST00000469247 791 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 PPM1AP1-201ENST00000502740 1135 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 RN7SKP21-201ENST00000516503 220 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC015922.4-201ENST00000612568 690 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC107308.1-201ENST00000615897 301 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AL121873.1-201ENST00000616013 524 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC068831.8-201ENST00000620171 435 ntBASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.83□□□□□ -1.8
RSPO3Q9BXY4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC015813.6-201ENST00000624409 5808 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 ERCC6-202ENST00000374127 1782 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 CCT8P1-201ENST00000413611 1657 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 MIR365B-201ENST00000362317 111 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC104297.1-201ENST00000393779 870 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 MTCO1P51-201ENST00000427672 1060 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC023141.6-201ENST00000429418 337 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL358472.1-201ENST00000431295 329 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL353597.2-202ENST00000434901 373 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC006011.1-201ENST00000442758 349 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 MTND2P28-201ENST00000457540 1044 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC091153.1-201ENST00000466297 402 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AF213884.1-201ENST00000488102 463 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 RPL35P6-201ENST00000490024 372 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC083829.1-201ENST00000503756 657 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AL592156.1-201ENST00000508758 304 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 HNRNPKP5-201ENST00000515300 253 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 IGKV2-38-201ENST00000517443 247 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 MYL12AP1-201ENST00000518490 515 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 UBTFL9-201ENST00000534504 1148 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC068446.3-201ENST00000555285 382 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC090953.1-201ENST00000604305 1092 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 AC009237.17-201ENST00000618111 748 ntBASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RSPO3Q9BXY4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms