Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PPIAP21-201ENST00000464473 501 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC109327.1-201ENST00000471666 403 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC090013.1-201ENST00000485147 480 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC026979.1-201ENST00000492525 396 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC106806.2-201ENST00000509365 500 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC092593.2-201ENST00000513866 913 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC084757.1-201ENST00000559987 490 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 BNIP3P7-201ENST00000605641 516 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC114781.5-201ENST00000615297 108 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AL021997.2-201ENST00000615674 271 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 SNX18P1Y-201ENST00000616231 511 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 RPL23AP61-201ENST00000623642 466 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AP000843.1-201ENST00000624880 701 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 SPATA2P1-201ENST00000431223 2055 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 CCT8P1-201ENST00000413611 1657 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 RN7SKP222-201ENST00000410651 315 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 RPL21P108-201ENST00000413857 481 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 SEC63P1-201ENST00000425785 1258 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 RPEP2-201ENST00000432149 701 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 ARL5AP3-201ENST00000439327 386 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 ACTR3P2-201ENST00000439585 1257 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 RPL5P13-201ENST00000462840 709 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC104629.2-201ENST00000468627 598 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC090151.1-201ENST00000520784 730 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AL352979.3-201ENST00000553515 247 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 PSMB7P1-201ENST00000556349 514 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC009268.1-201ENST00000561352 1203 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC021483.2-201ENST00000567415 758 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC023575.1-201ENST00000580510 358 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 KPNA2P3-201ENST00000584190 848 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC017076.1-201ENST00000607613 578 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 MLECP1-201ENST00000615893 709 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AL356121.2-201ENST00000624715 780 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC019080.5-201ENST00000624891 757 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AL139254.3-201ENST00000641097 674 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AC007342.9-201ENST00000623877 1385 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPRD1AQ96P16 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.48□□□□□ -1.69
RPRD1AQ96P16 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AL158163.1-201ENST00000603915 1649 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 CEACAMP8-201ENST00000413902 580 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 TPTE2P1-204ENST00000435256 593 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms