Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 QTRT1P1-201ENST00000604344 1078 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC104662.1-201ENST00000604448 511 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AC025175.1-201ENST00000606482 759 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 AL158062.1-201ENST00000619632 745 ntBASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC112Q8NEF3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC112Q8NEF3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 VPS35P1-201ENST00000563400 1518 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 RPL32P3-201ENST00000359025 275 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 MIR423-201ENST00000362201 94 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 SNORA70F-201ENST00000384142 135 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 HSPD1P16-201ENST00000402302 394 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 AL356967.1-201ENST00000406305 431 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 RPL12P28-201ENST00000430852 489 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 RPL36AP15-201ENST00000444514 266 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 MTND4LP12-201ENST00000448237 295 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 Z95152.1-201ENST00000453556 656 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 HSPE1P22-201ENST00000456856 327 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 OR5M2P-201ENST00000529003 936 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 DUX4L52-201ENST00000549363 777 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 MIR4715-201ENST00000584117 79 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 BMS1P21-201ENST00000634565 365 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 AC107027.3-201ENST00000565095 3473 ntBASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC112Q8NEF3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 Z82217.1-201ENST00000625157 8149 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 SNORD113.2-201ENST00000364166 89 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 RNU6-1263P-201ENST00000384601 106 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL049693.1-201ENST00000402760 611 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL139095.3-201ENST00000419672 1203 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL590609.2-201ENST00000421430 368 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC096638.2-201ENST00000434965 711 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 RPL23AP81-201ENST00000455252 467 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC093840.1-201ENST00000511599 336 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC005798.1-201ENST00000513715 387 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 MRPS35P3-201ENST00000603189 709 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL773545.4-201ENST00000637262 310 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL513478.4-201ENST00000641636 310 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 RLIMP2-201ENST00000427891 1563 ntBASIC4.57□□□□□ -1.68
CCDC112Q8NEF3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 MTND4P10-201ENST00000446199 1363 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 MARK2P15-201ENST00000432204 2186 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 RNU1-130P-201ENST00000363930 160 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 MIR129-1-201ENST00000384972 72 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AL049697.2-201ENST00000403708 294 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 RHEBP3-201ENST00000411920 351 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 CYP4F29P-201ENST00000420685 446 ntBASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC112Q8NEF3 RPS27AP7-201ENST00000422792 455 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms