Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FAM27D1-201ENST00000612308 341 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AL139254.3-201ENST00000641097 674 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC022893.2-201ENST00000564832 3296 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC008725.1-201ENST00000605123 2263 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 RNU4-39P-201ENST00000362455 127 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 RNA5SP509-201ENST00000364577 119 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 U3.22-201ENST00000391120 215 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AL607077.1-201ENST00000401718 499 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 MTND4LP13-201ENST00000425022 298 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 RPL23AP89-201ENST00000439324 255 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 EEF1A1P1-201ENST00000447052 739 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AL645939.1-201ENST00000453429 797 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 MTND6P32-201ENST00000457611 483 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC105918.1-201ENST00000474399 838 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 RN7SL691P-201ENST00000494487 301 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC093840.1-201ENST00000511599 336 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 RNA5SP519-201ENST00000516480 119 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 IGLVIV-53-201ENST00000520107 367 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 MIR7702-201ENST00000621931 59 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC138907.10-201ENST00000623708 983 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 CYP1D1P-201ENST00000416662 1433 ntBASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC65Q8IXS2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AL035696.2-201ENST00000407941 709 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 CYP4F29P-201ENST00000420685 446 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC023141.6-201ENST00000429418 337 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AL138787.1-202ENST00000437804 898 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 RN7SL303P-201ENST00000469773 251 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC091917.2-201ENST00000505002 744 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 OR51K1P-201ENST00000510214 950 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC008958.1-201ENST00000511047 682 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 KCTD9P2-201ENST00000512203 1013 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 RNA5SP154-201ENST00000516193 111 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 PSMB7P1-201ENST00000556349 514 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC124068.1-201ENST00000563131 678 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 MIR4277-201ENST00000578298 84 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AC009303.3-201ENST00000591103 736 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 AL645927.2-201ENST00000618350 349 ntBASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC65Q8IXS2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC010132.2-201ENST00000295493 1043 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC016769.2-201ENST00000414815 475 ntBASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC65Q8IXS2 ACTR3P2-201ENST00000439585 1257 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms