Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SKA3Q8IX90 NPM1P35-201ENST00000533043 868 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 BPIFA4P-203ENST00000603168 689 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC103792.1-201ENST00000603591 919 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC023509.5-201ENST00000617434 807 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC091905.2-201ENST00000623143 306 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC067852.7-201ENST00000623270 535 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 AC145207.9-201ENST00000623802 325 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 OR2L1P-202ENST00000641567 1023 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 AL031985.3-201ENST00000565390 2449 ntBASIC3.96□□□□□ -1.78
SKA3Q8IX90 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SKA3Q8IX90 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SKA3Q8IX90 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.96□□□□□ -1.78
SKA3Q8IX90 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SKA3Q8IX90 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SKA3Q8IX90 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SKA3Q8IX90 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 NXPH1-205ENST00000602349 1953 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 LINC00622-201ENST00000562811 1570 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 MFSD8-216ENST00000641147 4009 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 SNORD115-48-201ENST00000364764 76 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 RNU6-398P-201ENST00000384143 109 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 RNU6-532P-201ENST00000384318 107 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC093719.1-202ENST00000392735 373 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 RN7SKP222-201ENST00000410651 315 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC119751.6-201ENST00000416712 186 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 OR6K4P-201ENST00000423179 955 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC096741.1-201ENST00000472250 846 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC093720.1-201ENST00000505681 714 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AL592156.1-201ENST00000508758 304 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 RN7SKP92-201ENST00000517266 244 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 OR5AN2P-201ENST00000534535 896 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC027176.2-201ENST00000559166 746 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC027455.1-201ENST00000574104 594 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 OR4H6P-202ENST00000603819 340 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC073342.3-201ENST00000624211 193 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC139769.1-204ENST00000472297 1931 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 AC053481.2-202ENST00000582394 1500 ntBASIC3.95□□□□□ -1.78
SKA3Q8IX90 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SKA3Q8IX90 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SKA3Q8IX90 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SKA3Q8IX90 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA3Q8IX90 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SKA3Q8IX90 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA3Q8IX90 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.94□□□□□ -1.78
SKA3Q8IX90 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SKA3Q8IX90 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SKA3Q8IX90 SNORD51.1-201ENST00000365405 77 ntBASIC3.94□□□□□ -1.78
SKA3Q8IX90 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.94□□□□□ -1.78
SKA3Q8IX90 RPL7AP25-201ENST00000423357 805 ntBASIC3.94□□□□□ -1.78
SKA3Q8IX90 RPL23AP25-201ENST00000430973 463 ntBASIC3.94□□□□□ -1.78
SKA3Q8IX90 ZNF965P-201ENST00000432501 817 ntBASIC3.94□□□□□ -1.78
SKA3Q8IX90 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.94□□□□□ -1.78
SKA3Q8IX90 AL138878.2-201ENST00000440581 1241 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms