Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ENSAP3-201ENST00000312710 333 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AL590240.1-201ENST00000334118 313 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 ANKRD36P1-201ENST00000344424 659 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 MIR192-201ENST00000384915 110 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 Y_RNA.578-201ENST00000390903 88 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 MCTS2P-201ENST00000394552 546 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 VDAC2P1-201ENST00000399358 958 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 SSR1P2-201ENST00000415208 787 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 HIGD1AP15-201ENST00000416198 280 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 BX510359.2-201ENST00000417920 305 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 RPS17P8-201ENST00000434525 335 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC092013.1-201ENST00000438795 332 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 RPL36AP15-201ENST00000444514 266 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 ARL5AP2-201ENST00000444698 533 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 RN7SL354P-201ENST00000469282 294 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC090602.1-201ENST00000469695 252 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC011005.3-201ENST00000491624 395 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC104971.1-201ENST00000495117 578 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 RN7SL558P-201ENST00000497468 299 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC073358.1-201ENST00000505671 684 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 PRELID3BP5-201ENST00000508612 460 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 Y_RNA.719-201ENST00000517156 106 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 RNU6-709P-201ENST00000517257 104 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AL390334.1-201ENST00000556395 450 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC022022.2-201ENST00000602989 360 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC002069.2-201ENST00000603580 883 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC013468.1-201ENST00000608680 598 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC012414.7-202ENST00000622705 1090 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AP000648.2-201ENST00000624182 404 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 AC002525.1-201ENST00000624392 1622 ntBASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCN4BQ8IWT1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RNU6-543P-201ENST00000362576 108 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RNA5SP443-201ENST00000363083 132 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RNA5SP505-201ENST00000364748 108 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RNU6-398P-201ENST00000384143 109 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RNU1-82P-201ENST00000390851 165 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 XKRYP1-201ENST00000423438 492 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 FABP7P1-201ENST00000424004 391 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 XKRYP2-201ENST00000432915 492 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 VN1R25P-201ENST00000443385 738 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AL589765.3-201ENST00000446084 462 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC244505.3-201ENST00000454598 187 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RN7SL517P-201ENST00000462240 305 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC006463.2-201ENST00000473326 348 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC091868.1-201ENST00000508746 304 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC104108.1-201ENST00000509930 412 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 RNU2-30P-201ENST00000516209 141 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC083923.1-201ENST00000523708 376 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 OR5AN2P-201ENST00000534535 896 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC079075.1-201ENST00000559543 878 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 TLK1P1-201ENST00000456760 2440 ntBASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms