Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC084198.1-201ENST00000477747 402 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VPS13CQ709C8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 SNORD35B-201ENST00000363660 87 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC108751.2-201ENST00000469993 231 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC096576.1-201ENST00000489014 359 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC008802.1-201ENST00000519121 791 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC005086.4-201ENST00000623065 213 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS13CQ709C8 MTCO1P46-201ENST00000451639 1491 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS13CQ709C8 RPL23AP57-201ENST00000332361 466 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 IL6STP1-201ENST00000346911 1020 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 RPL7P60-201ENST00000397636 735 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 ZNF602P-201ENST00000405929 924 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 BTF3P5-201ENST00000457252 467 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS13CQ709C8 AL031666.3-201ENST00000609320 1006 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 AC095038.2-201ENST00000621464 1070 ntBASIC3.15□□□□□ -1.91
VPS13CQ709C8 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VPS13CQ709C8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS13CQ709C8 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS13CQ709C8 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS13CQ709C8 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 RNA5SP374-201ENST00000362939 125 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 XGY1-201ENST00000381172 446 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 RNU11-201ENST00000387069 134 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC093719.1-202ENST00000392735 373 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AL121878.1-201ENST00000418638 859 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 DPY19L1P2-201ENST00000426647 915 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC004924.1-201ENST00000480160 781 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 IGKV2-38-201ENST00000517443 247 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC068790.5-201ENST00000602741 355 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AL360012.1-201ENST00000602813 131 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC244258.1-201ENST00000637553 1071 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC007529.1-201ENST00000418574 2178 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC006517.1-201ENST00000480485 328 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC006504.3-201ENST00000586818 523 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 AL080315.1-201ENST00000406055 466 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 VDAC1P9-201ENST00000412766 841 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 RANP8-201ENST00000444720 713 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AP001992.1-205ENST00000462248 379 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 Vault.1-201ENST00000516474 102 ntBASIC3.14□□□□□ -1.91
VPS13CQ709C8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.14□□□□□ -1.91
VPS13CQ709C8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
VPS13CQ709C8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 RNA5SP306-201ENST00000411087 107 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 PHBP14-201ENST00000512887 367 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 RNA5SP230-201ENST00000517039 122 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AL451142.2-201ENST00000429076 2090 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC123769.2-201ENST00000624332 5984 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms