Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RN7SL763P-201ENST00000620922 284 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AP000676.3-201ENST00000623299 569 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 ZNF542P-204ENST00000482727 1305 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 AC114546.3-201ENST00000623582 1734 ntBASIC5.17□□□□□ -1.58
RNF220Q5VTB9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RNF220Q5VTB9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL450326.2-201ENST00000421913 1962 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC100757.1-201ENST00000616872 1835 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 Z95327.2-201ENST00000414579 1873 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AP001273.1-201ENST00000624493 3152 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 RN7SKP292-201ENST00000365522 317 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC005522.1-201ENST00000395416 346 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 PPIAP9-201ENST00000403866 498 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 RPS3AP2-201ENST00000407190 754 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 RBMY2KP-201ENST00000418221 992 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC098592.1-201ENST00000419352 333 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL358176.3-201ENST00000420757 454 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 RPL36AP10-201ENST00000421785 322 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC127526.2-201ENST00000426436 775 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC110602.1-201ENST00000437414 318 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC105402.2-201ENST00000438503 358 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC011225.1-201ENST00000457751 369 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AP000893.1-201ENST00000474462 794 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC114781.3-201ENST00000512083 142 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 OR5AZ1P-201ENST00000527448 943 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC107918.3-201ENST00000533272 382 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC091515.1-201ENST00000548110 679 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC092121.1-201ENST00000569452 202 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL109653.1-201ENST00000603091 248 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC106791.2-201ENST00000604680 391 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL353600.1-201ENST00000608148 251 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL139418.1-201ENST00000613613 177 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC025574.2-201ENST00000615621 514 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AL359757.1-201ENST00000623176 255 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 OR8B1P-202ENST00000641132 1178 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 AC235565.1-201ENST00000456962 1325 ntBASIC5.16□□□□□ -1.58
RNF220Q5VTB9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF220Q5VTB9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 AC007529.1-201ENST00000418574 2178 ntBASIC5.15□□□□□ -1.58
RNF220Q5VTB9 AL360270.2-201ENST00000562952 5985 ntBASIC5.15□□□□□ -1.58
RNF220Q5VTB9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF220Q5VTB9 MIR375-201ENST00000362103 64 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 RNU4-40P-201ENST00000364351 143 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 SNORA48.4-201ENST00000391089 134 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC013442.1-201ENST00000397347 228 ntBASIC5.15□□□□□ -1.59
RNF220Q5VTB9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF220Q5VTB9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms