Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 MIR708-201ENST00000390708 88 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AL049697.2-201ENST00000403708 294 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC093084.1-201ENST00000424233 687 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 MTND4LP13-201ENST00000425022 298 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 NPM1P26-201ENST00000426339 738 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 RPL23AP89-201ENST00000439324 255 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 UBE2V1P3-201ENST00000439651 417 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 ARL2BPP10-201ENST00000446487 531 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AL035551.1-201ENST00000446931 348 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 MTND2P25-201ENST00000449028 610 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 CCRL1P1-201ENST00000449542 1053 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC006517.1-201ENST00000480485 328 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC108145.1-201ENST00000503770 153 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 RNA5SP497-201ENST00000516081 97 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 SNORA70.17-201ENST00000516449 133 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC090281.1-201ENST00000523019 276 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NRF1Q16656 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
NRF1Q16656 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC107016.1-201ENST00000550463 337 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.08□□□□□ -1.76
NRF1Q16656 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC027228.2-201ENST00000567141 2154 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AC020914.4-201ENST00000597690 277 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AC007620.3-201ENST00000608131 497 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.08□□□□□ -1.76
NRF1Q16656 AC006065.6-201ENST00000625201 545 ntBASIC4.08□□□□□ -1.76
NRF1Q16656 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.08□□□□□ -1.76
NRF1Q16656 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
NRF1Q16656 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NRF1Q16656 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
NRF1Q16656 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 SNORA70.2-201ENST00000364506 135 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.07□□□□□ -1.76
NRF1Q16656 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
NRF1Q16656 MT-TP-201ENST00000387461 68 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 SNORD66.1-201ENST00000391230 76 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 AL034403.1-201ENST00000399414 885 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 AC006065.1-201ENST00000422539 802 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 RPS27AP7-201ENST00000422792 455 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.07□□□□□ -1.76
NRF1Q16656 MTND2P2-201ENST00000434633 945 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 AC093716.1-201ENST00000435923 377 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 RPL31P20-201ENST00000449593 360 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 RPS27AP17-201ENST00000463344 455 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.07□□□□□ -1.76
NRF1Q16656 AL360157.1-201ENST00000565962 87 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 AC023813.4-201ENST00000607580 580 ntBASIC4.07□□□□□ -1.76
NRF1Q16656 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.07□□□□□ -1.76
NRF1Q16656 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NRF1Q16656 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.07□□□□□ -1.76
NRF1Q16656 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NRF1Q16656 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NRF1Q16656 LINC02471-203ENST00000641941 4752 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.06□□□□□ -1.76
NRF1Q16656 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.06□□□□□ -1.76
NRF1Q16656 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NRF1Q16656 AC083899.2-201ENST00000423285 1376 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 AC017007.4-201ENST00000503353 1352 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
NRF1Q16656 RN7SKP224-201ENST00000364140 325 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 SNORD113.2-201ENST00000364166 89 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 RNU4-7P-201ENST00000364758 141 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NRF1Q16656 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NRF1Q16656 RNU6-152P-201ENST00000384037 107 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 MIR129-1-201ENST00000384972 72 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 AL356967.1-201ENST00000406305 431 ntBASIC4.06□□□□□ -1.76
NRF1Q16656 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms