Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.77□□□□□ -1.81
H3F3AP84243 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
H3F3AP84243 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.77□□□□□ -1.81
H3F3AP84243 AC027176.2-201ENST00000559166 746 ntBASIC3.77□□□□□ -1.81
H3F3AP84243 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.77□□□□□ -1.81
H3F3AP84243 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.77□□□□□ -1.81
H3F3AP84243 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.77□□□□□ -1.81
H3F3AP84243 AC025946.2-201ENST00000603398 234 ntBASIC3.77□□□□□ -1.81
H3F3AP84243 AL139286.1-201ENST00000604465 483 ntBASIC3.77□□□□□ -1.81
H3F3AP84243 MIR432-201ENST00000606207 94 ntBASIC3.77□□□□□ -1.81
H3F3AP84243 AL445423.1-201ENST00000609941 536 ntBASIC3.77□□□□□ -1.81
H3F3AP84243 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
H3F3AP84243 AP006248.2-201ENST00000623309 592 ntBASIC3.77□□□□□ -1.81
H3F3AP84243 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.77□□□□□ -1.81
H3F3AP84243 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
H3F3AP84243 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
H3F3AP84243 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.77□□□□□ -1.81
H3F3AP84243 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
H3F3AP84243 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
H3F3AP84243 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
H3F3AP84243 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
H3F3AP84243 OR6C69P-201ENST00000394268 893 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H3F3AP84243 Y_RNA.625-201ENST00000411256 107 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.76□□□□□ -1.81
H3F3AP84243 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.76□□□□□ -1.81
H3F3AP84243 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.76□□□□□ -1.81
H3F3AP84243 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
H3F3AP84243 RPL23AP89-201ENST00000439324 255 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.76□□□□□ -1.81
H3F3AP84243 CLIC4P1-201ENST00000453177 535 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AL354710.1-201ENST00000453641 246 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 RPL7AP52-201ENST00000458096 790 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AC108475.1-201ENST00000507880 950 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.76□□□□□ -1.81
H3F3AP84243 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 IGHV3-63-201ENST00000518422 341 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.76□□□□□ -1.81
H3F3AP84243 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.76□□□□□ -1.81
H3F3AP84243 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.76□□□□□ -1.81
H3F3AP84243 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.76□□□□□ -1.81
H3F3AP84243 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H3F3AP84243 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.76□□□□□ -1.81
H3F3AP84243 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.76□□□□□ -1.81
H3F3AP84243 AC006116.5-201ENST00000591936 559 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H3F3AP84243 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.76□□□□□ -1.81
H3F3AP84243 AC017076.1-201ENST00000607613 578 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AC005962.2-201ENST00000611427 652 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.76□□□□□ -1.81
H3F3AP84243 MLECP1-201ENST00000615893 709 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 MIR8059-201ENST00000620427 81 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.76□□□□□ -1.81
H3F3AP84243 OR52H1-202ENST00000641796 1061 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 LARP1BP1-201ENST00000506036 1359 ntBASIC3.76□□□□□ -1.81
H3F3AP84243 AL451142.2-201ENST00000429076 2090 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
H3F3AP84243 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3F3AP84243 IQCB2P-201ENST00000401788 1633 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC092162.3-201ENST00000624511 1624 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3F3AP84243 FAM3C2-201ENST00000312214 681 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
H3F3AP84243 RNA5SP502-201ENST00000362694 119 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
H3F3AP84243 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H3F3AP84243 AL607077.1-201ENST00000401718 499 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 RNA5SP39-201ENST00000411245 120 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.75□□□□□ -1.81
H3F3AP84243 YWHAEP5-201ENST00000431545 765 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.75□□□□□ -1.81
H3F3AP84243 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.75□□□□□ -1.81
H3F3AP84243 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.75□□□□□ -1.81
H3F3AP84243 NDUFS5P3-201ENST00000450668 321 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 IFNWP4-201ENST00000453148 294 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 RAD23BP3-201ENST00000454157 1152 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AP002371.1-201ENST00000463604 433 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC109327.1-201ENST00000471666 403 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 RPS29P19-201ENST00000479709 171 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC105137.1-201ENST00000484355 562 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.75□□□□□ -1.81
H3F3AP84243 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.75□□□□□ -1.81
H3F3AP84243 TVP23BP1-201ENST00000557500 617 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 CYP4A43P-201ENST00000568156 121 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.75□□□□□ -1.81
H3F3AP84243 FAM106CP-201ENST00000582212 507 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.75□□□□□ -1.81
H3F3AP84243 IPO5P1-202ENST00000600039 287 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC064801.1-201ENST00000612025 407 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AL356274.1-201ENST00000617064 410 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 MIR7702-201ENST00000621931 59 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 AC067852.7-201ENST00000623270 535 ntBASIC3.75□□□□□ -1.81
H3F3AP84243 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
H3F3AP84243 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms