Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBA52P62987 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
UBA52P62987 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
UBA52P62987 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
UBA52P62987 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
UBA52P62987 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 OR4G1P-202ENST00000641173 1788 ntBASIC3.67□□□□□ -1.82
UBA52P62987 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 RNU1-64P-201ENST00000365443 163 ntBASIC3.67□□□□□ -1.82
UBA52P62987 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 MIR3074-201ENST00000384885 81 ntBASIC3.67□□□□□ -1.82
UBA52P62987 RPS26P8-201ENST00000393490 348 ntBASIC3.67□□□□□ -1.82
UBA52P62987 SDHCP2-201ENST00000398565 501 ntBASIC3.67□□□□□ -1.82
UBA52P62987 SNORA3C-201ENST00000408792 125 ntBASIC3.67□□□□□ -1.82
UBA52P62987 OR51B3P-201ENST00000412287 913 ntBASIC3.67□□□□□ -1.82
UBA52P62987 RAD23BP1-201ENST00000421404 1227 ntBASIC3.67□□□□□ -1.82
UBA52P62987 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 AC093698.1-201ENST00000423843 571 ntBASIC3.67□□□□□ -1.82
UBA52P62987 USP12PY-201ENST00000427677 1064 ntBASIC3.67□□□□□ -1.82
UBA52P62987 ACTR3P2-201ENST00000439585 1257 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC114755.5-201ENST00000447760 831 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.67□□□□□ -1.82
UBA52P62987 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.67□□□□□ -1.82
UBA52P62987 ABCF2P2-201ENST00000450549 296 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC069499.1-201ENST00000489433 509 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC106872.2-201ENST00000494303 480 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.67□□□□□ -1.82
UBA52P62987 PGBD4P4-201ENST00000509673 613 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.67□□□□□ -1.82
UBA52P62987 AC010476.1-201ENST00000519111 851 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.67□□□□□ -1.82
UBA52P62987 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
UBA52P62987 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.67□□□□□ -1.82
UBA52P62987 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.67□□□□□ -1.82
UBA52P62987 AC093227.2-201ENST00000589357 285 ntBASIC3.67□□□□□ -1.82
UBA52P62987 BNIP3P33-201ENST00000598912 569 ntBASIC3.67□□□□□ -1.82
UBA52P62987 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.67□□□□□ -1.82
UBA52P62987 AC090181.2-201ENST00000602975 672 ntBASIC3.67□□□□□ -1.82
UBA52P62987 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.67□□□□□ -1.82
UBA52P62987 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBA52P62987 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
UBA52P62987 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.67□□□□□ -1.82
UBA52P62987 AC093311.1-201ENST00000506586 2021 ntBASIC3.66□□□□□ -1.82
UBA52P62987 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBA52P62987 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.66□□□□□ -1.82
UBA52P62987 MTND4P10-201ENST00000446199 1363 ntBASIC3.66□□□□□ -1.82
UBA52P62987 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBA52P62987 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.66□□□□□ -1.82
UBA52P62987 BDP1P-201ENST00000582658 1990 ntBASIC3.66□□□□□ -1.82
UBA52P62987 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBA52P62987 SNORA37-201ENST00000384504 129 ntBASIC3.66□□□□□ -1.82
UBA52P62987 MIR659-201ENST00000384963 97 ntBASIC3.66□□□□□ -1.82
UBA52P62987 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.66□□□□□ -1.82
UBA52P62987 OR6K4P-201ENST00000423179 955 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AL158073.1-201ENST00000426848 1104 ntBASIC3.66□□□□□ -1.82
UBA52P62987 RPS12P10-201ENST00000427031 377 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.66□□□□□ -1.82
UBA52P62987 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 FTH1P16-201ENST00000435241 552 ntBASIC3.66□□□□□ -1.82
UBA52P62987 RPL7P19-201ENST00000469948 618 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 AC006517.1-201ENST00000480485 328 ntBASIC3.66□□□□□ -1.82
UBA52P62987 RNA5SP143-201ENST00000516936 115 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 OR8G5-201ENST00000524943 1041 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AP000827.1-201ENST00000527814 258 ntBASIC3.66□□□□□ -1.82
UBA52P62987 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AC008126.1-201ENST00000549019 480 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 PSMB7P1-201ENST00000556349 514 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.66□□□□□ -1.82
UBA52P62987 AC090312.1-201ENST00000580637 348 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC3.66□□□□□ -1.82
UBA52P62987 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.66□□□□□ -1.82
UBA52P62987 Z98200.1-201ENST00000607298 470 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AL392048.1-201ENST00000613946 534 ntBASIC3.66□□□□□ -1.82
UBA52P62987 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UBA52P62987 AL445567.2-201ENST00000618935 498 ntBASIC3.66□□□□□ -1.82
UBA52P62987 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.66□□□□□ -1.82
UBA52P62987 AL391684.1-202ENST00000641293 1636 ntBASIC3.66□□□□□ -1.82
UBA52P62987 AC139769.1-204ENST00000472297 1931 ntBASIC3.66□□□□□ -1.82
UBA52P62987 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBA52P62987 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.65□□□□□ -1.82
UBA52P62987 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.65□□□□□ -1.82
UBA52P62987 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
UBA52P62987 AC022893.2-201ENST00000564832 3296 ntBASIC3.65□□□□□ -1.82
UBA52P62987 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
UBA52P62987 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
UBA52P62987 AC135352.1-201ENST00000506173 1418 ntBASIC3.65□□□□□ -1.83
UBA52P62987 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
UBA52P62987 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms