Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC108463.1-201ENST00000450258 347 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 RPL7AP52-201ENST00000458096 790 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AC008379.1-201ENST00000463655 464 ntBASIC3.9□□□□□ -1.79
LMO4P61968 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 DAP3-209ENST00000465375 729 ntTSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 AC090602.1-201ENST00000469695 252 ntBASIC3.9□□□□□ -1.79
LMO4P61968 RPL21P18-201ENST00000469899 480 ntBASIC3.9□□□□□ -1.79
LMO4P61968 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 SETP6-201ENST00000479329 568 ntBASIC3.9□□□□□ -1.79
LMO4P61968 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 AC107398.1-201ENST00000486904 505 ntBASIC3.9□□□□□ -1.79
LMO4P61968 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 MTCO1P47-201ENST00000523889 1271 ntBASIC3.9□□□□□ -1.79
LMO4P61968 HAUS1P3-201ENST00000523909 662 ntBASIC3.9□□□□□ -1.79
LMO4P61968 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.9□□□□□ -1.79
LMO4P61968 AC007834.2-201ENST00000536310 343 ntBASIC3.9□□□□□ -1.79
LMO4P61968 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 AC008083.2-201ENST00000546707 476 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AL049830.4-201ENST00000555149 351 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 MTND3P13-201ENST00000574391 343 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.9□□□□□ -1.79
LMO4P61968 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.9□□□□□ -1.79
LMO4P61968 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 RPL12P25-202ENST00000598100 674 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AC015726.1-201ENST00000602353 681 ntBASIC3.9□□□□□ -1.79
LMO4P61968 AL358072.1-201ENST00000604156 575 ntBASIC3.9□□□□□ -1.79
LMO4P61968 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.9□□□□□ -1.79
LMO4P61968 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 MIR6758-201ENST00000620653 63 ntBASIC3.9□□□□□ -1.79
LMO4P61968 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LMO4P61968 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LMO4P61968 AL137100.1-201ENST00000556703 1620 ntBASIC3.9□□□□□ -1.79
LMO4P61968 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
LMO4P61968 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.9□□□□□ -1.79
LMO4P61968 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LMO4P61968 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 OR56B2P-202ENST00000641377 2453 ntBASIC3.89□□□□□ -1.79
LMO4P61968 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LMO4P61968 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 AC093849.1-201ENST00000563631 2209 ntBASIC3.89□□□□□ -1.79
LMO4P61968 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LMO4P61968 RNU6-468P-201ENST00000384003 109 ntBASIC3.89□□□□□ -1.79
LMO4P61968 RNU4-31P-201ENST00000384211 141 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC233289.1-201ENST00000403700 508 ntBASIC3.89□□□□□ -1.79
LMO4P61968 HMGB3P19-201ENST00000403971 560 ntBASIC3.89□□□□□ -1.79
LMO4P61968 ELOCP19-201ENST00000411919 318 ntBASIC3.89□□□□□ -1.79
LMO4P61968 P2RY10P2-201ENST00000416730 913 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC009302.1-201ENST00000417147 390 ntBASIC3.89□□□□□ -1.79
LMO4P61968 UQCRBP1-201ENST00000421129 336 ntBASIC3.89□□□□□ -1.79
LMO4P61968 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.89□□□□□ -1.79
LMO4P61968 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 VTI1BP4-201ENST00000427516 527 ntBASIC3.89□□□□□ -1.79
LMO4P61968 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.89□□□□□ -1.79
LMO4P61968 CDY12P-201ENST00000440679 1015 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 RPL21P133-201ENST00000443666 476 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 AC044797.1-201ENST00000445744 679 ntBASIC3.89□□□□□ -1.79
LMO4P61968 CDY13P-201ENST00000445813 1015 ntBASIC3.89□□□□□ -1.79
LMO4P61968 RSL24D1P3-201ENST00000449255 495 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC112492.1-201ENST00000449607 712 ntBASIC3.89□□□□□ -1.79
LMO4P61968 RPL7P55-201ENST00000450522 746 ntBASIC3.89□□□□□ -1.79
LMO4P61968 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.89□□□□□ -1.79
LMO4P61968 HMGB1P26-201ENST00000452520 628 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.89□□□□□ -1.79
LMO4P61968 MTND2P28-201ENST00000457540 1044 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AC245028.2-201ENST00000458673 253 ntBASIC3.89□□□□□ -1.79
LMO4P61968 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms