Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.17□□□□□ -1.74
PKNOX1P55347 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PKNOX1P55347 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.16□□□□□ -1.74
PKNOX1P55347 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PKNOX1P55347 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 GCNT6-201ENST00000379591 934 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PKNOX1P55347 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 GSTA12P-201ENST00000402398 508 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 JKAMPP1-201ENST00000413804 919 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 TMSB10P2-201ENST00000416049 131 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 AL590762.4-201ENST00000425885 253 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AL353898.1-201ENST00000444055 238 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC104306.1-201ENST00000449702 371 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AL513533.1-201ENST00000453728 415 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.16□□□□□ -1.74
PKNOX1P55347 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 RPL21P126-201ENST00000470049 478 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 NDUFA5P12-201ENST00000503796 343 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.16□□□□□ -1.74
PKNOX1P55347 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.16□□□□□ -1.74
PKNOX1P55347 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.16□□□□□ -1.74
PKNOX1P55347 AC068446.3-201ENST00000555285 382 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AL049539.1-201ENST00000611964 459 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC026368.1-201ENST00000614934 690 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC145207.9-201ENST00000623802 325 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC010300.1-201ENST00000600671 5134 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 AC009229.4-201ENST00000623854 1947 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 AC018555.1-201ENST00000567548 1980 ntBASIC4.16□□□□□ -1.74
PKNOX1P55347 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PKNOX1P55347 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PKNOX1P55347 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PKNOX1P55347 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.15□□□□□ -1.74
PKNOX1P55347 USP9YP4-201ENST00000424401 1745 ntBASIC4.15□□□□□ -1.74
PKNOX1P55347 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
PKNOX1P55347 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PKNOX1P55347 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PKNOX1P55347 AL035419.1-201ENST00000397037 564 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 RPS20P25-201ENST00000412447 352 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 RPL6P29-201ENST00000414863 865 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PKNOX1P55347 BTF3P9-201ENST00000418784 283 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AC006455.6-201ENST00000426192 893 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 YWHAEP5-201ENST00000431545 765 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AL606490.7-201ENST00000433136 191 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 RPL23AP89-201ENST00000439324 255 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 ELOCP10-201ENST00000440624 327 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AL512326.1-201ENST00000443050 721 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 ARL2BPP10-201ENST00000446487 531 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 RAD23BP3-201ENST00000454157 1152 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 RPL23AP81-201ENST00000455252 467 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 RPL7AP52-201ENST00000458096 790 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AC018638.3-201ENST00000461273 132 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
PKNOX1P55347 AC006517.1-201ENST00000480485 328 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 PRELID3BP7-201ENST00000503606 469 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.15□□□□□ -1.75
PKNOX1P55347 AC021087.2-201ENST00000504656 1203 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 ACTR6P1-201ENST00000514311 1104 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.15□□□□□ -1.75
PKNOX1P55347 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.15□□□□□ -1.75
PKNOX1P55347 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.15□□□□□ -1.75
PKNOX1P55347 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.15□□□□□ -1.75
PKNOX1P55347 MIR4480-201ENST00000582492 71 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AC090953.1-201ENST00000604305 1092 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 ELOCP34-201ENST00000604436 327 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AC113403.1-201ENST00000604910 193 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 BX322635.1-201ENST00000605804 496 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AC084036.1-201ENST00000609190 508 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.15□□□□□ -1.75
PKNOX1P55347 AL161616.1-201ENST00000611867 286 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 AL121873.1-201ENST00000616013 524 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PKNOX1P55347 MIR6715B-201ENST00000637172 77 ntBASIC4.15□□□□□ -1.75
PKNOX1P55347 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.15□□□□□ -1.75
PKNOX1P55347 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PKNOX1P55347 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.15□□□□□ -1.75
PKNOX1P55347 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.15□□□□□ -1.75
PKNOX1P55347 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.14□□□□□ -1.75
PKNOX1P55347 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PKNOX1P55347 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.14□□□□□ -1.75
PKNOX1P55347 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PKNOX1P55347 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PKNOX1P55347 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PKNOX1P55347 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PKNOX1P55347 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.14□□□□□ -1.75
PKNOX1P55347 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.14□□□□□ -1.75
PKNOX1P55347 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms