Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RN7SKP114-201ENST00000410327 279 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RN7SKP125-201ENST00000410481 302 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RNU6-77P-201ENST00000410554 91 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH12P55289 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH12P55289 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH12P55289 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH12P55289 COX7BP2-201ENST00000437976 242 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH12P55289 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH12P55289 RHEBP2-201ENST00000450289 600 ntBASIC4.61□□□□□ -1.67
CDH12P55289 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH12P55289 ART2BP-201ENST00000453501 499 ntBASIC4.61□□□□□ -1.67
CDH12P55289 HMGB1P4-201ENST00000455362 567 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AL133244.1-201ENST00000456007 258 ntBASIC4.61□□□□□ -1.67
CDH12P55289 CYCSP34-201ENST00000458172 304 ntBASIC4.61□□□□□ -1.67
CDH12P55289 PRDX3P4-201ENST00000470828 747 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RN7SL174P-201ENST00000475578 289 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RN7SL799P-201ENST00000475891 298 ntBASIC4.61□□□□□ -1.67
CDH12P55289 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 AC073522.1-201ENST00000483312 377 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RPS21P4-201ENST00000487122 248 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH12P55289 AC020890.1-201ENST00000491837 504 ntBASIC4.61□□□□□ -1.67
CDH12P55289 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH12P55289 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 AC024558.1-201ENST00000505008 528 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RNU6-416P-201ENST00000516265 103 ntBASIC4.61□□□□□ -1.67
CDH12P55289 RNU5A-4P-201ENST00000516588 111 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AC023632.1-201ENST00000518463 375 ntBASIC4.61□□□□□ -1.67
CDH12P55289 HMGB1P23-201ENST00000518743 568 ntBASIC4.61□□□□□ -1.67
CDH12P55289 IGJP1-201ENST00000522682 475 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AC018442.3-201ENST00000523025 183 ntBASIC4.61□□□□□ -1.67
CDH12P55289 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.61□□□□□ -1.67
CDH12P55289 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.61□□□□□ -1.67
CDH12P55289 MTCYBP27-201ENST00000555160 670 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AL390334.1-201ENST00000556395 450 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AC095055.1-201ENST00000603472 1113 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AC021749.1-201ENST00000604322 607 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AL021707.7-201ENST00000607991 416 ntBASIC4.61□□□□□ -1.67
CDH12P55289 AL592148.2-201ENST00000612210 372 ntBASIC4.61□□□□□ -1.67
CDH12P55289 MIR7973-1-201ENST00000614683 76 ntBASIC4.61□□□□□ -1.67
CDH12P55289 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 MIR1322-201ENST00000638013 71 ntBASIC4.61□□□□□ -1.67
CDH12P55289 LINC01355-201ENST00000566551 5444 ntBASIC4.61□□□□□ -1.67
CDH12P55289 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 AC104454.1-201ENST00000421341 1401 ntBASIC4.61□□□□□ -1.67
CDH12P55289 CASC19-206ENST00000641028 1430 ntBASIC4.61□□□□□ -1.67
CDH12P55289 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 AC139713.2-215ENST00000641428 5037 ntBASIC4.6□□□□□ -1.67
CDH12P55289 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH12P55289 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH12P55289 SNORA17.1-201ENST00000362945 126 ntBASIC4.6□□□□□ -1.67
CDH12P55289 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 OR1L1-202ENST00000373686 1083 ntBASIC4.6□□□□□ -1.67
CDH12P55289 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 SNORA11C-201ENST00000408532 129 ntBASIC4.6□□□□□ -1.67
CDH12P55289 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH12P55289 RN7SKP126-201ENST00000411143 300 ntBASIC4.6□□□□□ -1.67
CDH12P55289 MTND4P22-201ENST00000413116 1169 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 MTND2P18-201ENST00000419962 1030 ntBASIC4.6□□□□□ -1.67
CDH12P55289 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 CKS1BP6-201ENST00000424932 240 ntBASIC4.6□□□□□ -1.67
CDH12P55289 USP9YP11-201ENST00000427537 717 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH12P55289 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 OR52B5P-201ENST00000435337 951 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC073143.1-201ENST00000436316 395 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 AL008629.1-201ENST00000438615 184 ntBASIC4.6□□□□□ -1.67
CDH12P55289 MRPL42P4-201ENST00000453267 443 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 RPL7AP52-201ENST00000458096 790 ntBASIC4.6□□□□□ -1.67
CDH12P55289 RPS17P2-201ENST00000461663 408 ntBASIC4.6□□□□□ -1.67
CDH12P55289 OR2AO1P-201ENST00000476497 403 ntBASIC4.6□□□□□ -1.67
CDH12P55289 UBA52P7-201ENST00000486088 380 ntBASIC4.6□□□□□ -1.67
CDH12P55289 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 IGKV2-18-201ENST00000522607 343 ntBASIC4.6□□□□□ -1.67
CDH12P55289 IGKV3D-34-201ENST00000522638 302 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC012339.2-201ENST00000523996 453 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 AC092747.2-201ENST00000545069 983 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 AADACP1-206ENST00000561502 1193 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms