Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.81□□□□□ -1.64
LIMK1P53667 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.81□□□□□ -1.64
LIMK1P53667 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LIMK1P53667 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LIMK1P53667 AC093311.1-201ENST00000506586 2021 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK1P53667 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AL122126.1-201ENST00000546905 1318 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC017079.1-201ENST00000333650 415 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 RNA5SP28-201ENST00000363841 119 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 SNORA70C-201ENST00000384538 135 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 MIR589-201ENST00000385238 99 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 RPL17P50-201ENST00000396131 546 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 MTCO1P52-201ENST00000433928 531 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 AL031663.1-201ENST00000437445 219 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 Z95327.1-201ENST00000446082 482 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC069540.1-201ENST00000446320 988 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 EIF2S2P5-201ENST00000457635 968 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 SNORA84-201ENST00000459229 133 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 snoU13.22-201ENST00000459428 104 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 RPL23AP56-201ENST00000460778 453 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 RPS20P4-201ENST00000461659 355 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AL591473.1-201ENST00000464297 313 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AC011037.1-201ENST00000483964 558 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 RPL7P41-201ENST00000485823 957 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC023050.1-201ENST00000498198 304 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC111193.1-201ENST00000504097 155 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC020593.1-201ENST00000507399 299 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC106806.2-201ENST00000509365 500 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 MTCO1P35-201ENST00000515270 228 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AC092451.2-201ENST00000538746 658 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
LIMK1P53667 CR383656.14-201ENST00000551951 406 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.8□□□□□ -1.64
LIMK1P53667 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.8□□□□□ -1.64
LIMK1P53667 AL109741.3-201ENST00000561748 592 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.8□□□□□ -1.64
LIMK1P53667 AC034105.4-201ENST00000568304 277 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 TMF1P1-201ENST00000576058 373 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 MIR4458-201ENST00000578872 75 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK1P53667 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK1P53667 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AC008782.1-201ENST00000603386 430 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 AC079880.2-201ENST00000603790 1213 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 AC020978.9-201ENST00000624380 1141 ntBASIC4.8□□□□□ -1.64
LIMK1P53667 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
LIMK1P53667 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LIMK1P53667 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK1P53667 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.8□□□□□ -1.64
LIMK1P53667 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.8□□□□□ -1.64
LIMK1P53667 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 AL022322.2-201ENST00000624072 20397 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 AL139811.1-201ENST00000424779 2299 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LIMK1P53667 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 OR4K17-201ENST00000315543 1032 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LIMK1P53667 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 RNU6-252P-201ENST00000363232 107 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 SNORA2.3-201ENST00000383920 135 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 MIR708-201ENST00000390708 88 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 RPL32P23-201ENST00000397237 405 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 RPL36AP36-201ENST00000418616 301 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 RPEP3-201ENST00000425462 676 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.79□□□□□ -1.64
LIMK1P53667 AC097499.1-201ENST00000444277 208 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 NOP56P2-201ENST00000447491 769 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AC010733.1-201ENST00000451515 401 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 RNA5SP103-201ENST00000459503 118 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LIMK1P53667 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.79□□□□□ -1.64
LIMK1P53667 MTCO2P9-201ENST00000503214 694 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AC016550.1-201ENST00000505348 785 ntBASIC4.79□□□□□ -1.64
LIMK1P53667 AC112518.2-201ENST00000508565 425 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms