Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MTND6P32-201ENST00000457611 483 ntBASIC4.21□□□□□ -1.74
HTTP42858 AC108751.2-201ENST00000469993 231 ntBASIC4.21□□□□□ -1.74
HTTP42858 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.21□□□□□ -1.74
HTTP42858 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.21□□□□□ -1.74
HTTP42858 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.21□□□□□ -1.74
HTTP42858 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.21□□□□□ -1.74
HTTP42858 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.21□□□□□ -1.74
HTTP42858 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC4.21□□□□□ -1.74
HTTP42858 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HTTP42858 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 AC234772.1-201ENST00000377927 937 ntBASIC4.21□□□□□ -1.74
HTTP42858 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.21□□□□□ -1.74
HTTP42858 S100A11P2-201ENST00000467589 312 ntBASIC4.21□□□□□ -1.74
HTTP42858 AC026784.1-201ENST00000507986 352 ntBASIC4.21□□□□□ -1.74
HTTP42858 RNA5SP208-201ENST00000516156 78 ntBASIC4.21□□□□□ -1.74
HTTP42858 RNU2-27P-201ENST00000516185 142 ntBASIC4.21□□□□□ -1.74
HTTP42858 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.21□□□□□ -1.74
HTTP42858 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.21□□□□□ -1.74
HTTP42858 AC027216.1-201ENST00000577726 685 ntBASIC4.21□□□□□ -1.74
HTTP42858 AC006023.1-201ENST00000603944 259 ntBASIC4.21□□□□□ -1.74
HTTP42858 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HTTP42858 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HTTP42858 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.2□□□□□ -1.74
HTTP42858 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 MTCO1P46-201ENST00000451639 1491 ntBASIC4.2□□□□□ -1.74
HTTP42858 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.2□□□□□ -1.74
HTTP42858 SNORD96B-201ENST00000386148 79 ntBASIC4.2□□□□□ -1.74
HTTP42858 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 RNF19BPX-201ENST00000426224 625 ntBASIC4.2□□□□□ -1.74
HTTP42858 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 MIR5186-201ENST00000577504 120 ntBASIC4.2□□□□□ -1.74
HTTP42858 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 XGY1-201ENST00000381172 446 ntBASIC4.2□□□□□ -1.74
HTTP42858 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HTTP42858 RPS27AP15-201ENST00000447672 466 ntBASIC4.2□□□□□ -1.74
HTTP42858 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.2□□□□□ -1.74
HTTP42858 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 AC008802.1-201ENST00000519121 791 ntBASIC4.2□□□□□ -1.74
HTTP42858 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.2□□□□□ -1.74
HTTP42858 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.2□□□□□ -1.74
HTTP42858 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.2□□□□□ -1.74
HTTP42858 BDH2P1-201ENST00000602288 736 ntBASIC4.2□□□□□ -1.74
HTTP42858 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HTTP42858 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HTTP42858 ZNF962P-201ENST00000443465 3140 ntBASIC4.19□□□□□ -1.74
HTTP42858 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 EIF4A1P1-201ENST00000420241 934 ntBASIC4.19□□□□□ -1.74
HTTP42858 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.19□□□□□ -1.74
HTTP42858 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 RNA5SP164-201ENST00000516533 110 ntBASIC4.19□□□□□ -1.74
HTTP42858 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.19□□□□□ -1.74
HTTP42858 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.19□□□□□ -1.74
HTTP42858 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 AC096644.3-201ENST00000416788 338 ntBASIC4.19□□□□□ -1.74
HTTP42858 HMGB1P21-201ENST00000502313 581 ntBASIC4.19□□□□□ -1.74
HTTP42858 CYCSP28-201ENST00000534284 321 ntBASIC4.19□□□□□ -1.74
HTTP42858 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HTTP42858 RNU4-35P-201ENST00000362588 141 ntBASIC4.19□□□□□ -1.74
HTTP42858 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.19□□□□□ -1.74
HTTP42858 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.19□□□□□ -1.74
HTTP42858 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 AC069240.1-201ENST00000548774 375 ntBASIC4.19□□□□□ -1.74
HTTP42858 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC4.19□□□□□ -1.74
HTTP42858 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HTTP42858 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.18□□□□□ -1.74
HTTP42858 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HTTP42858 HSPD1P14-201ENST00000432666 1618 ntBASIC4.18□□□□□ -1.74
HTTP42858 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HTTP42858 MIR449A-201ENST00000362113 91 ntBASIC4.18□□□□□ -1.74
HTTP42858 VDAC1P9-201ENST00000412766 841 ntBASIC4.18□□□□□ -1.74
HTTP42858 SETD6P1-201ENST00000444575 317 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms