Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL592310.1-201ENST00000414330 671 ntBASIC5.26□□□□□ -1.57
CIITAP33076 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.26□□□□□ -1.57
CIITAP33076 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.26□□□□□ -1.57
CIITAP33076 AC115285.1-201ENST00000424879 736 ntBASIC5.26□□□□□ -1.57
CIITAP33076 MTND2P5-201ENST00000432656 1006 ntBASIC5.26□□□□□ -1.57
CIITAP33076 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.26□□□□□ -1.57
CIITAP33076 TDGF1P1-201ENST00000445734 527 ntBASIC5.26□□□□□ -1.57
CIITAP33076 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.26□□□□□ -1.57
CIITAP33076 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.26□□□□□ -1.57
CIITAP33076 PSMC1P13-201ENST00000458195 985 ntBASIC5.26□□□□□ -1.57
CIITAP33076 TPT1P1-201ENST00000458495 518 ntBASIC5.26□□□□□ -1.57
CIITAP33076 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.26□□□□□ -1.57
CIITAP33076 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.26□□□□□ -1.57
CIITAP33076 OR5AN2P-201ENST00000534535 896 ntBASIC5.26□□□□□ -1.57
CIITAP33076 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.26□□□□□ -1.57
CIITAP33076 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.26□□□□□ -1.57
CIITAP33076 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.26□□□□□ -1.57
CIITAP33076 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 AL450336.1-201ENST00000605180 586 ntBASIC5.26□□□□□ -1.57
CIITAP33076 RNU4-5P-201ENST00000607255 135 ntBASIC5.26□□□□□ -1.57
CIITAP33076 MIR6820-201ENST00000611508 62 ntBASIC5.26□□□□□ -1.57
CIITAP33076 AP000346.3-201ENST00000622821 210 ntBASIC5.26□□□□□ -1.57
CIITAP33076 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CIITAP33076 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CIITAP33076 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CIITAP33076 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CIITAP33076 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 AL132640.2-201ENST00000559968 1698 ntBASIC5.25□□□□□ -1.57
CIITAP33076 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CIITAP33076 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CIITAP33076 OR14L1P-202ENST00000641545 3009 ntBASIC5.25□□□□□ -1.57
CIITAP33076 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CIITAP33076 RNU1-83P-201ENST00000363426 164 ntBASIC5.25□□□□□ -1.57
CIITAP33076 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AC233289.1-201ENST00000403700 508 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AL592291.1-201ENST00000403830 352 ntBASIC5.25□□□□□ -1.57
CIITAP33076 RPS4XP9-201ENST00000405151 780 ntBASIC5.25□□□□□ -1.57
CIITAP33076 TRGV6-201ENST00000417928 299 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 AC245028.1-201ENST00000423259 256 ntBASIC5.25□□□□□ -1.57
CIITAP33076 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 MTCO1P53-201ENST00000441633 699 ntBASIC5.25□□□□□ -1.57
CIITAP33076 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.25□□□□□ -1.57
CIITAP33076 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.25□□□□□ -1.57
CIITAP33076 RPL23AP72-201ENST00000492447 435 ntBASIC5.25□□□□□ -1.57
CIITAP33076 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.25□□□□□ -1.57
CIITAP33076 PRELID3BP5-201ENST00000508612 460 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 RNU6-276P-201ENST00000516114 96 ntBASIC5.25□□□□□ -1.57
CIITAP33076 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.25□□□□□ -1.57
CIITAP33076 SETP1-201ENST00000556014 845 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.25□□□□□ -1.57
CIITAP33076 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 MIR4330-201ENST00000579077 105 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.25□□□□□ -1.57
CIITAP33076 AL049844.2-201ENST00000604280 628 ntBASIC5.25□□□□□ -1.57
CIITAP33076 AC025811.1-201ENST00000604312 472 ntBASIC5.25□□□□□ -1.57
CIITAP33076 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.25□□□□□ -1.57
CIITAP33076 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.25□□□□□ -1.57
CIITAP33076 CU459211.1-201ENST00000635667 749 ntBASIC5.25□□□□□ -1.57
CIITAP33076 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.25□□□□□ -1.57
CIITAP33076 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CIITAP33076 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.25□□□□□ -1.57
CIITAP33076 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 AC107027.3-201ENST00000565095 3473 ntBASIC5.25□□□□□ -1.57
CIITAP33076 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CIITAP33076 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 AL445437.1-201ENST00000623157 3087 ntBASIC5.25□□□□□ -1.57
CIITAP33076 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CIITAP33076 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CIITAP33076 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.24□□□□□ -1.57
CIITAP33076 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.24□□□□□ -1.57
CIITAP33076 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CIITAP33076 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CIITAP33076 RNU4-44P-201ENST00000363050 141 ntBASIC5.24□□□□□ -1.57
CIITAP33076 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CIITAP33076 MIR320B1-201ENST00000390209 79 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms