Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CASQ1P31415 RNU1-87P-201ENST00000363727 170 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 SNORD6-201ENST00000365444 73 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.58□□□□□ -1.68
CASQ1P31415 RNU6-532P-201ENST00000384318 107 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 SNORA37-201ENST00000384504 129 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 RNA5SP332-201ENST00000391063 115 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.58□□□□□ -1.68
CASQ1P31415 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.58□□□□□ -1.68
CASQ1P31415 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CASQ1P31415 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CASQ1P31415 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.58□□□□□ -1.68
CASQ1P31415 ELOCP6-201ENST00000429066 328 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.58□□□□□ -1.68
CASQ1P31415 LYPLA1P1-201ENST00000434514 622 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CASQ1P31415 AC005154.2-201ENST00000438110 379 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC114495.1-201ENST00000441274 436 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CASQ1P31415 ELOCP12-201ENST00000458706 328 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 COPS8P2-201ENST00000473228 627 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC069499.1-201ENST00000489433 509 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 RN7SL812P-201ENST00000493791 279 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AP001086.1-201ENST00000494882 321 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC109458.1-201ENST00000508858 316 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 OR5H4P-201ENST00000510851 923 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC008802.1-201ENST00000519121 791 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CASQ1P31415 MIR5010-201ENST00000582846 120 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.58□□□□□ -1.68
CASQ1P31415 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CASQ1P31415 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.58□□□□□ -1.68
CASQ1P31415 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CASQ1P31415 MIR6853-201ENST00000619642 74 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC095038.2-201ENST00000621464 1070 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CASQ1P31415 AC119674.1-212ENST00000641155 993 ntBASIC4.58□□□□□ -1.68
CASQ1P31415 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASQ1P31415 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CASQ1P31415 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASQ1P31415 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.58□□□□□ -1.68
CASQ1P31415 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CASQ1P31415 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.57□□□□□ -1.68
CASQ1P31415 AP000534.2-201ENST00000412729 568 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 PRELID3BP11-201ENST00000414230 479 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 SNRPFP1-201ENST00000414761 252 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AC004074.1-201ENST00000421810 1063 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AC115285.1-201ENST00000424879 736 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AL365396.1-201ENST00000430854 671 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 BMS1P19-201ENST00000433925 393 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 YWHAZP2-201ENST00000440317 728 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AL356535.1-201ENST00000440335 398 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 CEACAMP4-201ENST00000457676 421 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 AC104164.2-201ENST00000496953 495 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 HMGB1P21-201ENST00000502313 581 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.57□□□□□ -1.68
CASQ1P31415 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.57□□□□□ -1.68
CASQ1P31415 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.57□□□□□ -1.68
CASQ1P31415 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CASQ1P31415 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.57□□□□□ -1.68
CASQ1P31415 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.57□□□□□ -1.68
CASQ1P31415 AL109741.3-201ENST00000561748 592 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AC068020.1-201ENST00000594215 661 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AC244505.7-201ENST00000599675 272 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AL355816.1-201ENST00000607951 118 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 AC012531.5-201ENST00000611375 151 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CASQ1P31415 AC092162.3-201ENST00000624511 1624 ntBASIC4.57□□□□□ -1.68
CASQ1P31415 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CASQ1P31415 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CASQ1P31415 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.56□□□□□ -1.68
CASQ1P31415 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CASQ1P31415 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CASQ1P31415 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.56□□□□□ -1.68
CASQ1P31415 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.56□□□□□ -1.68
CASQ1P31415 DCAF13P1-201ENST00000495256 1330 ntBASIC4.56□□□□□ -1.68
CASQ1P31415 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CASQ1P31415 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CASQ1P31415 MIR659-201ENST00000384963 97 ntBASIC4.56□□□□□ -1.68
CASQ1P31415 AC097374.1-203ENST00000400783 485 ntBASIC4.56□□□□□ -1.68
CASQ1P31415 RN7SKP206-201ENST00000410823 293 ntBASIC4.56□□□□□ -1.68
CASQ1P31415 BX510359.2-201ENST00000417920 305 ntBASIC4.56□□□□□ -1.68
CASQ1P31415 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CASQ1P31415 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.56□□□□□ -1.68
CASQ1P31415 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.56□□□□□ -1.68
CASQ1P31415 AL162151.2-201ENST00000448875 158 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms