Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.13□□□□□ -1.75
SHC1P29353 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SHC1P29353 HSPA8P17-201ENST00000427029 1382 ntBASIC4.13□□□□□ -1.75
SHC1P29353 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHC1P29353 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SHC1P29353 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHC1P29353 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC106754.1-201ENST00000562632 1513 ntBASIC4.12□□□□□ -1.75
SHC1P29353 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SHC1P29353 SNORA71.2-201ENST00000364941 134 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL121834.1-202ENST00000404494 277 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 AC119751.6-201ENST00000416712 186 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC006065.1-201ENST00000422539 802 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC093084.1-201ENST00000424233 687 ntBASIC4.12□□□□□ -1.75
SHC1P29353 MTCO2P23-201ENST00000425216 680 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 RPL23AP93-201ENST00000440847 484 ntBASIC4.12□□□□□ -1.75
SHC1P29353 RPL7L1P1-201ENST00000448259 785 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.12□□□□□ -1.75
SHC1P29353 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.12□□□□□ -1.75
SHC1P29353 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 NPM1P17-201ENST00000479221 602 ntBASIC4.12□□□□□ -1.75
SHC1P29353 RN7SL459P-201ENST00000481078 302 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 AC012158.1-204ENST00000483430 465 ntBASIC4.12□□□□□ -1.75
SHC1P29353 PRELID3BP6-201ENST00000503839 571 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC111000.3-201ENST00000508057 576 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHC1P29353 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 CDH12P4-201ENST00000517835 295 ntBASIC4.12□□□□□ -1.75
SHC1P29353 CDH12P3-201ENST00000517935 295 ntBASIC4.12□□□□□ -1.75
SHC1P29353 CDH12P1-201ENST00000518435 295 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC109635.6-201ENST00000525487 1113 ntBASIC4.12□□□□□ -1.75
SHC1P29353 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHC1P29353 AC100770.1-201ENST00000532310 322 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC093014.1-201ENST00000548926 724 ntBASIC4.12□□□□□ -1.75
SHC1P29353 MIR4330-201ENST00000579077 105 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.12□□□□□ -1.75
SHC1P29353 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.12□□□□□ -1.75
SHC1P29353 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.12□□□□□ -1.75
SHC1P29353 AC004908.3-201ENST00000610248 625 ntBASIC4.12□□□□□ -1.75
SHC1P29353 MIR8084-201ENST00000614105 89 ntBASIC4.12□□□□□ -1.75
SHC1P29353 MIR1264-201ENST00000616374 69 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC023509.5-201ENST00000617434 807 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL645927.2-201ENST00000618350 349 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL669942.2-201ENST00000620352 697 ntBASIC4.12□□□□□ -1.75
SHC1P29353 MIR7154-201ENST00000620673 73 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AC015722.2-201ENST00000622210 551 ntBASIC4.12□□□□□ -1.75
SHC1P29353 AL356863.1-201ENST00000623378 1080 ntBASIC4.12□□□□□ -1.75
SHC1P29353 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.12□□□□□ -1.75
SHC1P29353 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHC1P29353 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHC1P29353 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SHC1P29353 VN2R3P-201ENST00000422626 1412 ntBASIC4.12□□□□□ -1.75
SHC1P29353 DHX40P1-201ENST00000588725 1412 ntBASIC4.12□□□□□ -1.75
SHC1P29353 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.12□□□□□ -1.75
SHC1P29353 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SHC1P29353 RNU1-108P-201ENST00000362556 161 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RNU4-7P-201ENST00000364758 141 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.11□□□□□ -1.75
SHC1P29353 ST13P16-201ENST00000401760 781 ntBASIC4.11□□□□□ -1.75
SHC1P29353 Z98745.1-201ENST00000402553 494 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RN7SKP167-201ENST00000411047 285 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AL024507.1-201ENST00000412741 274 ntBASIC4.11□□□□□ -1.75
SHC1P29353 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 AC106883.1-201ENST00000418805 562 ntBASIC4.11□□□□□ -1.75
SHC1P29353 GTF2IP2-201ENST00000424290 697 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AP000936.3-201ENST00000438127 255 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AL138878.2-201ENST00000440581 1241 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RRM2P4-201ENST00000441721 562 ntBASIC4.11□□□□□ -1.75
SHC1P29353 ARL2BPP10-201ENST00000446487 531 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.11□□□□□ -1.75
SHC1P29353 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.11□□□□□ -1.75
SHC1P29353 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
SHC1P29353 RN7SL738P-201ENST00000470264 297 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC068587.2-201ENST00000478386 781 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC104982.1-201ENST00000478775 574 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.11□□□□□ -1.75
SHC1P29353 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.11□□□□□ -1.75
SHC1P29353 AK4P6-201ENST00000505168 528 ntBASIC4.11□□□□□ -1.75
SHC1P29353 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHC1P29353 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.11□□□□□ -1.75
SHC1P29353 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.11□□□□□ -1.75
SHC1P29353 AC067904.2-201ENST00000517322 1283 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.11□□□□□ -1.75
SHC1P29353 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.11□□□□□ -1.75
SHC1P29353 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.11□□□□□ -1.75
SHC1P29353 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.11□□□□□ -1.75
SHC1P29353 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.11□□□□□ -1.75
SHC1P29353 MTATP6P24-201ENST00000576835 677 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC090666.1-201ENST00000578241 445 ntBASIC4.11□□□□□ -1.75
SHC1P29353 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms