Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC087276.1-201ENST00000529659 480 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.79□□□□□ -1.32
ERCC3P19447 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.79□□□□□ -1.32
ERCC3P19447 MIR548AB-201ENST00000584917 84 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC107982.3-201ENST00000584957 985 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC087683.1-201ENST00000591187 441 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 AC115286.1-201ENST00000604298 434 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC005084.1-201ENST00000605160 304 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC103710.4-201ENST00000609301 899 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC100793.4-201ENST00000613683 429 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC006338.2-201ENST00000616864 791 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AL121890.2-201ENST00000617644 465 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 AC018755.4-201ENST00000619715 454 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 MIR6719-201ENST00000622428 87 ntBASIC6.79□□□□□ -1.32
ERCC3P19447 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.79□□□□□ -1.32
ERCC3P19447 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC3P19447 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC3P19447 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC3P19447 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 XPOTP1-201ENST00000443317 2398 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 OR4A15-201ENST00000314706 1035 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ERCC3P19447 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 RPS4XP5-201ENST00000419038 768 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC3P19447 SDCBPP2-201ENST00000424643 885 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC3P19447 ZYG11AP1-201ENST00000430329 837 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ERCC3P19447 HMGB3P24-201ENST00000433260 622 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 SUMO2P2-201ENST00000456482 255 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC3P19447 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 AC109458.1-201ENST00000508858 316 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 SNORA43.3-201ENST00000517240 103 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 NPM1P6-201ENST00000521088 871 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC3P19447 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC3P19447 AC245505.1-201ENST00000556398 224 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC3P19447 AP001004.1-201ENST00000582468 324 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AC090181.2-201ENST00000602975 672 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 AC010200.2-201ENST00000605098 235 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 uc_338.26-201ENST00000612659 160 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
ERCC3P19447 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC3P19447 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 AL359955.1-201ENST00000455242 3275 ntBASIC6.78□□□□□ -1.32
ERCC3P19447 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC3P19447 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC3P19447 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
ERCC3P19447 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 AC092070.2-203ENST00000598377 3644 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC103591.2-201ENST00000265259 766 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 RNU6-433P-201ENST00000363216 104 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 RNA5SP391-201ENST00000363456 119 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
ERCC3P19447 RNU6-1119P-201ENST00000384349 108 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 RNU6-1215P-201ENST00000384441 102 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AC025750.1-201ENST00000399891 379 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 AL121972.1-201ENST00000402023 252 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC007899.1-201ENST00000412776 775 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC3P19447 HSPD1P12-201ENST00000429127 1069 ntBASIC6.77□□□□□ -1.33
ERCC3P19447 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.77□□□□□ -1.33
ERCC3P19447 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms