Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VCANP13611 AL137141.1-201ENST00000624622 4836 ntBASIC3.99□□□□□ -1.77
VCANP13611 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.99□□□□□ -1.77
VCANP13611 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VCANP13611 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VCANP13611 RBMY2UP-201ENST00000453474 324 ntBASIC3.99□□□□□ -1.77
VCANP13611 AL049874.2-201ENST00000492636 288 ntBASIC3.99□□□□□ -1.77
VCANP13611 BNIP3P41-201ENST00000503774 571 ntBASIC3.99□□□□□ -1.77
VCANP13611 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.99□□□□□ -1.77
VCANP13611 AL590240.3-201ENST00000621416 943 ntBASIC3.99□□□□□ -1.77
VCANP13611 AC007546.2-201ENST00000623996 360 ntBASIC3.99□□□□□ -1.77
VCANP13611 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.99□□□□□ -1.77
VCANP13611 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.98□□□□□ -1.77
VCANP13611 RPL23AP12-201ENST00000467573 473 ntBASIC3.98□□□□□ -1.77
VCANP13611 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.98□□□□□ -1.77
VCANP13611 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.98□□□□□ -1.77
VCANP13611 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.98□□□□□ -1.77
VCANP13611 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.98□□□□□ -1.77
VCANP13611 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 NPM1P47-201ENST00000560843 856 ntBASIC3.98□□□□□ -1.77
VCANP13611 AC022655.2-201ENST00000577280 318 ntBASIC3.98□□□□□ -1.77
VCANP13611 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.98□□□□□ -1.77
VCANP13611 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.98□□□□□ -1.77
VCANP13611 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC3.98□□□□□ -1.77
VCANP13611 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
VCANP13611 SAMMSON-213ENST00000641336 1521 ntBASIC3.98□□□□□ -1.77
VCANP13611 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 FTX-215ENST00000638681 9771 ntTSL 5 BASIC3.98□□□□□ -1.77
VCANP13611 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC3.98□□□□□ -1.77
VCANP13611 RPS20P32-201ENST00000456044 356 ntBASIC3.98□□□□□ -1.77
VCANP13611 RNU2-27P-201ENST00000516185 142 ntBASIC3.98□□□□□ -1.77
VCANP13611 AC006349.1-201ENST00000555526 235 ntBASIC3.98□□□□□ -1.77
VCANP13611 AL606834.2-201ENST00000602954 668 ntBASIC3.98□□□□□ -1.77
VCANP13611 AL353726.1-201ENST00000614041 1000 ntBASIC3.98□□□□□ -1.77
VCANP13611 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCANP13611 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.97□□□□□ -1.77
VCANP13611 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.97□□□□□ -1.77
VCANP13611 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 MIR4276-201ENST00000584832 70 ntBASIC3.97□□□□□ -1.77
VCANP13611 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.97□□□□□ -1.77
VCANP13611 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 ATP5JP1-201ENST00000431631 322 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC107083.1-201ENST00000439643 279 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC005002.1-201ENST00000447458 540 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 AC090686.1-201ENST00000481577 749 ntBASIC3.97□□□□□ -1.77
VCANP13611 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.97□□□□□ -1.77
VCANP13611 PTGES3P3-201ENST00000511479 482 ntBASIC3.97□□□□□ -1.77
VCANP13611 MIR4524B-201ENST00000581569 115 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC091178.1-203ENST00000584586 279 ntBASIC3.97□□□□□ -1.77
VCANP13611 MIR8069-1-201ENST00000616627 86 ntBASIC3.97□□□□□ -1.77
VCANP13611 MIR8069-2-201ENST00000621412 86 ntBASIC3.97□□□□□ -1.77
VCANP13611 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC3.97□□□□□ -1.77
VCANP13611 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 SCARNA15-201ENST00000607520 4325 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC3.97□□□□□ -1.77
VCANP13611 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 RNA5SP399-201ENST00000364003 117 ntBASIC3.97□□□□□ -1.77
VCANP13611 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 HMGB1P21-201ENST00000502313 581 ntBASIC3.97□□□□□ -1.77
VCANP13611 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.97□□□□□ -1.77
VCANP13611 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 MIR7843-201ENST00000622274 79 ntBASIC3.97□□□□□ -1.77
VCANP13611 AC009313.2-201ENST00000417893 1941 ntBASIC3.97□□□□□ -1.77
VCANP13611 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 THAP12P5-201ENST00000405864 2275 ntBASIC3.97□□□□□ -1.77
VCANP13611 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
VCANP13611 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VCANP13611 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.96□□□□□ -1.77
VCANP13611 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC3.96□□□□□ -1.77
VCANP13611 AL365440.1-201ENST00000436135 2167 ntBASIC3.96□□□□□ -1.77
VCANP13611 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.96□□□□□ -1.77
VCANP13611 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
VCANP13611 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
VCANP13611 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 SNORA5B-201ENST00000363786 132 ntBASIC3.96□□□□□ -1.78
VCANP13611 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.96□□□□□ -1.78
VCANP13611 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms