Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RAP1BP3-201ENST00000407180 549 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 RN7SKP56-201ENST00000410513 331 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.67□□□□□ -1.5
COL6A2P12110 ATG4AP1-201ENST00000416893 538 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 AL365184.2-201ENST00000431139 435 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.67□□□□□ -1.5
COL6A2P12110 MED28P3-201ENST00000444288 531 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 TIMM8BP2-201ENST00000445940 251 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC108463.1-201ENST00000450258 347 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC112206.1-201ENST00000468416 477 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 RPL23AP71-201ENST00000470966 469 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 ATP5LP5-201ENST00000483050 299 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.67□□□□□ -1.5
COL6A2P12110 COX6B1P6-201ENST00000522347 255 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.67□□□□□ -1.5
COL6A2P12110 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.67□□□□□ -1.5
COL6A2P12110 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC137768.1-201ENST00000549998 553 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 OR11J2P-201ENST00000555298 907 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC068135.2-201ENST00000569293 1028 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 MTCO3P24-201ENST00000572729 782 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC136618.2-201ENST00000575091 400 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 MIR4310-201ENST00000582950 57 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 MIR4260-201ENST00000583107 67 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC005771.1-201ENST00000585581 349 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AL137072.1-201ENST00000603444 466 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC015871.2-201ENST00000603605 948 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AL596327.1-201ENST00000603629 213 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC069304.2-201ENST00000605154 435 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AL022394.1-201ENST00000606979 292 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC138965.3-201ENST00000623875 498 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AL683826.1-201ENST00000624104 627 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 SEPT14P19-203ENST00000633205 211 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 AC244258.1-201ENST00000637553 1071 ntBASIC5.67□□□□□ -1.5
COL6A2P12110 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL6A2P12110 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL6A2P12110 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
COL6A2P12110 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 AC007938.2-201ENST00000604666 2634 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC027088.4-201ENST00000611559 1947 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
COL6A2P12110 OR9G4-201ENST00000302957 984 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 OR4G2P-201ENST00000328113 903 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 RN7SKP145-201ENST00000363291 303 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 Y_RNA.248-201ENST00000364501 109 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 RNU6-259P-201ENST00000383999 107 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 MIR130A-201ENST00000385274 89 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL6A2P12110 HMGB3P7-201ENST00000400214 611 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 MIR1275-201ENST00000408770 80 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 BOLA3P4-201ENST00000418151 400 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.66□□□□□ -1.5
COL6A2P12110 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC073069.1-201ENST00000428657 441 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 TMEM183AP1-205ENST00000432739 290 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 DNAJC19P4-201ENST00000440115 345 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 ARPC3P2-201ENST00000457786 533 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC004924.1-201ENST00000480160 781 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 RN7SL570P-201ENST00000484405 292 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL6A2P12110 AC011352.3-201ENST00000505162 593 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC112484.3-201ENST00000505910 329 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 HMGB1P28-201ENST00000507778 552 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 HIGD1AP6-201ENST00000521833 279 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC239860.2-201ENST00000525886 270 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AP003396.4-201ENST00000527574 265 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
COL6A2P12110 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.66□□□□□ -1.5
COL6A2P12110 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.66□□□□□ -1.5
COL6A2P12110 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.66□□□□□ -1.5
COL6A2P12110 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.66□□□□□ -1.5
COL6A2P12110 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.66□□□□□ -1.5
COL6A2P12110 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.66□□□□□ -1.5
COL6A2P12110 ZNF519P2-201ENST00000557032 169 ntBASIC5.66□□□□□ -1.5
COL6A2P12110 ZNF519P3-201ENST00000557158 1032 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms