Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC145207.9-201ENST00000623802 325 ntBASIC4.62□□□□□ -1.67
TPM1P09493 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TPM1P09493 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TPM1P09493 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TPM1P09493 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.61□□□□□ -1.67
TPM1P09493 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.61□□□□□ -1.67
TPM1P09493 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TPM1P09493 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TPM1P09493 SNORD113.2-201ENST00000364166 89 ntBASIC4.61□□□□□ -1.67
TPM1P09493 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 LYPLA1P1-201ENST00000434514 622 ntBASIC4.61□□□□□ -1.67
TPM1P09493 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.61□□□□□ -1.67
TPM1P09493 AL512326.1-201ENST00000443050 721 ntBASIC4.61□□□□□ -1.67
TPM1P09493 FABP3P2-201ENST00000453169 399 ntBASIC4.61□□□□□ -1.67
TPM1P09493 RPS3AP53-201ENST00000454716 778 ntBASIC4.61□□□□□ -1.67
TPM1P09493 RPS3AP41-201ENST00000462701 778 ntBASIC4.61□□□□□ -1.67
TPM1P09493 RPL12P20-201ENST00000475538 479 ntBASIC4.61□□□□□ -1.67
TPM1P09493 MTND6P6-201ENST00000478031 263 ntBASIC4.61□□□□□ -1.67
TPM1P09493 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.61□□□□□ -1.67
TPM1P09493 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.61□□□□□ -1.67
TPM1P09493 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.61□□□□□ -1.67
TPM1P09493 AC021483.2-201ENST00000567415 758 ntBASIC4.61□□□□□ -1.67
TPM1P09493 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.61□□□□□ -1.67
TPM1P09493 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.61□□□□□ -1.67
TPM1P09493 uc_338.13-201ENST00000618243 179 ntBASIC4.61□□□□□ -1.67
TPM1P09493 AP005264.7-201ENST00000625003 745 ntBASIC4.61□□□□□ -1.67
TPM1P09493 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
TPM1P09493 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.61□□□□□ -1.67
TPM1P09493 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.61□□□□□ -1.67
TPM1P09493 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
TPM1P09493 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TPM1P09493 AC008033.1-201ENST00000216407 1162 ntBASIC4.6□□□□□ -1.67
TPM1P09493 RNU1-130P-201ENST00000363930 160 ntBASIC4.6□□□□□ -1.67
TPM1P09493 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TPM1P09493 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.6□□□□□ -1.67
TPM1P09493 SNORA11F-201ENST00000408237 128 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.6□□□□□ -1.67
TPM1P09493 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.6□□□□□ -1.67
TPM1P09493 AC073464.3-201ENST00000422564 712 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.6□□□□□ -1.67
TPM1P09493 AC073069.1-201ENST00000428657 441 ntBASIC4.6□□□□□ -1.67
TPM1P09493 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.6□□□□□ -1.67
TPM1P09493 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.6□□□□□ -1.67
TPM1P09493 OR6C72P-201ENST00000451403 892 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AC010326.1-201ENST00000462726 602 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.6□□□□□ -1.67
TPM1P09493 AC004453.1-201ENST00000487895 408 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.6□□□□□ -1.67
TPM1P09493 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AP001922.4-201ENST00000526967 290 ntBASIC4.6□□□□□ -1.67
TPM1P09493 BRD9P1-201ENST00000529855 560 ntBASIC4.6□□□□□ -1.67
TPM1P09493 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.6□□□□□ -1.67
TPM1P09493 RN7SL690P-201ENST00000582087 240 ntBASIC4.6□□□□□ -1.67
TPM1P09493 AC110743.1-201ENST00000584870 478 ntBASIC4.6□□□□□ -1.67
TPM1P09493 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TPM1P09493 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.6□□□□□ -1.67
TPM1P09493 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TPM1P09493 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.6□□□□□ -1.67
TPM1P09493 AC109780.1-201ENST00000451768 1344 ntBASIC4.6□□□□□ -1.67
TPM1P09493 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TPM1P09493 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
TPM1P09493 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TPM1P09493 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TPM1P09493 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
TPM1P09493 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TPM1P09493 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TPM1P09493 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TPM1P09493 OR5P1P-201ENST00000299512 925 ntBASIC4.59□□□□□ -1.67
TPM1P09493 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TPM1P09493 AC131971.1-201ENST00000332881 1482 ntBASIC4.59□□□□□ -1.67
TPM1P09493 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TPM1P09493 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
TPM1P09493 SNORA51.1-201ENST00000363243 140 ntBASIC4.59□□□□□ -1.67
TPM1P09493 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
TPM1P09493 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TPM1P09493 MIR92A2-201ENST00000385299 75 ntBASIC4.59□□□□□ -1.67
TPM1P09493 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TPM1P09493 AC048351.1-201ENST00000420064 602 ntBASIC4.59□□□□□ -1.67
TPM1P09493 AC104837.2-201ENST00000427236 424 ntBASIC4.59□□□□□ -1.67
TPM1P09493 RPL23AP46-201ENST00000438548 490 ntBASIC4.59□□□□□ -1.67
TPM1P09493 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 EXTL2P1-201ENST00000446218 416 ntBASIC4.59□□□□□ -1.67
TPM1P09493 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.59□□□□□ -1.67
TPM1P09493 RPL21P126-201ENST00000470049 478 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms