Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXC4P09017 AC010857.1-201ENST00000606398 594 ntBASIC4.19□□□□□ -1.74
HOXC4P09017 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC4P09017 AC026368.1-201ENST00000614934 690 ntBASIC4.19□□□□□ -1.74
HOXC4P09017 RNA5SP196-201ENST00000625967 102 ntBASIC4.19□□□□□ -1.74
HOXC4P09017 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC4P09017 AC008013.2-202ENST00000637965 364 ntBASIC4.19□□□□□ -1.74
HOXC4P09017 AL450326.2-201ENST00000421913 1962 ntBASIC4.19□□□□□ -1.74
HOXC4P09017 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC4P09017 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC4P09017 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC4P09017 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HOXC4P09017 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC4P09017 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXC4P09017 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXC4P09017 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
HOXC4P09017 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC4P09017 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC4P09017 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HOXC4P09017 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 MIR1179-201ENST00000408703 91 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC4P09017 AC007064.3-201ENST00000422608 359 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 MRPL50P1-201ENST00000431951 384 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AL357520.1-201ENST00000441557 453 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 EEF1A1P1-201ENST00000447052 739 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC4P09017 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 PSMC1P13-201ENST00000458195 985 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC4P09017 AC022336.1-201ENST00000475510 337 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 VWA8P1-201ENST00000510889 176 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXC4P09017 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXC4P09017 SS18L2P2-201ENST00000583960 235 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 SLC25A36P1-201ENST00000590111 465 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AL591034.3-201ENST00000605511 685 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 AL592494.3-201ENST00000609485 464 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AC015813.4-201ENST00000610469 179 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 AC010608.2-201ENST00000624830 470 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXC4P09017 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 LINC01355-201ENST00000566551 5444 ntBASIC4.18□□□□□ -1.74
HOXC4P09017 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXC4P09017 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXC4P09017 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
HOXC4P09017 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HOXC4P09017 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 AC007342.9-201ENST00000623877 1385 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HOXC4P09017 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 MIR365B-201ENST00000362317 111 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 RNU1-13P-201ENST00000384499 162 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 ENSAP1-201ENST00000392855 326 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 HSPD1P16-201ENST00000402302 394 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 RN7SKP263-201ENST00000411194 309 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXC4P09017 AL590806.1-201ENST00000415818 853 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AC108032.1-201ENST00000416706 207 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXC4P09017 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 ARL4AP3-201ENST00000441452 574 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC4P09017 AC022431.1-201ENST00000450941 438 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AL121877.1-201ENST00000453704 622 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 RPL5P32-201ENST00000454085 879 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 FTH1P2-201ENST00000466086 412 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AL161747.1-201ENST00000480068 358 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
HOXC4P09017 MYL12AP1-201ENST00000518490 515 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AC090281.1-201ENST00000523019 276 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AC105233.3-201ENST00000531125 744 ntBASIC4.17□□□□□ -1.74
HOXC4P09017 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXC4P09017 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXC4P09017 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms